Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04532	Tnfa	GSE9055	Umbilical vein cells	Human	6.5h	10ng/ml	EID4892

Response Information :

Types	Number	Response transcription factors
Up-regulation	305	AFF2; AFF3; AJUBA; ALX4; ARID4B; ARNTL2; ATF3; ATF5; ATN1; BARX1; BATF2; BATF3; BAZ1B; BAZ2A; BCL9L; BCOR; BHLHE40; BHLHE41; BRCA2; BRD4; BRD8; CARHSP1; CASZ1; CBX2; CD3D; CDK2; CDX2; CDYL; CEBPD; CERS3; CHD2; CITED4; CNOT2; CREB3; CREB3L2; CTCFL; DAXX; DCC; DLX2; DLX5; DMRT2; DMRTB1; DMRTC2; DR1; E2F1; E2F2; ELK1; EN1; ENO1; ERBB2; ESRRB; ESRRG; ETS1; ETV7; EYA1; FERD3L; FOSL1; FOXA1; FOXA2; FOXD1; FOXD2; FOXF1; FOXG1; FOXN1; FOXR2; GABPB1; GATAD2A; GLI1; GLI2; GRHL2; GRHL3; GRIP1; HABP4; HDAC10; HDAC5; HDGF; HELZ2; HES2; HEY1; HEYL; HIVEP2; HMGA1; HMX2; HNF4A; HNRNPD; HOXB1; HOXB3; HOXC10; HOXC12; HOXC9; HR; IKZF1; IKZF2; IKZF3; IL31RA; ING2; ING5; IRF1; IRF2; IRF7; IRF9; IRX2; IRX5; ISL1; JUNB; KDM1B; KDM5A; KDM5D; KLF4; KLF7; KLF9; L3MBTL4; LHX9; LIN28A; LIN28B; LMO1; LZTS1; MAEL; MAF; MAFG; MAK; MAP3K10; MAPK8IP1; MBD1; MED15; MESP1; MITF; MKL1; MNT; MSC; MSX1; MTA2; MYC; MYCL; MYOCD; MYOG; MYRF; NAB1; NCOA7; NCOR1; NFKB1; NFKB2; NFKBIA; NFKBIZ; NR1I2; NR4A3; NR6A1; NRIP1; NRL; OLIG1; OLIG3; ONECUT1; ONECUT2; ONECUT3; OTX1; OVOL1; PAX2; PAX4; PAX6; PBRM1; PCBD2; PDX1; PGR; PHF12; PIAS2; POU2F2; POU2F3; POU4F1; POU5F2; PPARD; PRDM10; PRDM2; PRDM9; PROX1; PROX2; PRRX1; PTTG1; RARG; RAX2; RELA; RELB; REPIN1; RHOA; RSF1; RUNX2; SALL3; SATB2; SCRT1; SHOX2; SIN3A; SIRT7; SIX3; SIX4; SKIL; SMAD3; SMAD4; SMAD9; SNAI2; SNAPC4; SOX1; SOX10; SOX13; SP140L; SP5; SRCAP; SREBF1; SRY; STAT5A; STAT6; TADA1; TAF1L; TAF4B; TAF6L; TBL1X; TBL1Y; TBR1; TCEA1; TCERG1; TCF24; TEAD3; TFAP2D; TFDP2; TFE3; THAP5; TLX2; TLX3; TP53; TRAF6; TRIM11; TRIM22; TULP2; TWIST2; USP22; UTF1; VDR; VGLL1; VGLL2; VGLL4; VHL; YBX2; ZBED4; ZBTB24; ZBTB26; ZBTB40; ZBTB42; ZBTB47; ZBTB7C; ZFP1; ZFP69B; ZFY; ZIC1; ZIC5; ZMIZ2; ZMYND11; ZNF157; ZNF160; ZNF19; ZNF214; ZNF235; ZNF254; ZNF286A; ZNF296; ZNF3; ZNF334; ZNF341; ZNF345; ZNF362; ZNF384; ZNF425; ZNF443; ZNF444; ZNF446; ZNF469; ZNF524; ZNF526; ZNF530; ZNF541; ZNF543; ZNF550; ZNF560; ZNF563; ZNF567; ZNF585B; ZNF594; ZNF595; ZNF620; ZNF625; ZNF646; ZNF671; ZNF674; ZNF683; ZNF697; ZNF7; ZNF71; ZNF749; ZNF79; ZNF800; ZNF808; ZNF852; ZNF853; ZNF90; ZSCAN12; ZSCAN25; ZSCAN4; ZXDB
Down-regulation	326	ADNP; AEBP1; AHR; AIRE; ALX1; ALX3; ARID1B; ARID4A; ATF2; ATF6B; BARX2; BATF; BCL11A; BCL6B; BNC2; BPTF; BRDT; BRWD1; CAPN15; CARF; CBFA2T3; CBX5; CBX7; CCAR1; CDC5L; CHD9; CREBZF; CREM; CSDC2; DACH1; DBP; DDX54; DMRTA2; DTX1; DYRK1B; E2F8; EBF3; EGR2; EGR3; EID2; ELF3; EMX2; ERF; ERG; ETV1; ETV5; FHL5; FOXB1; FOXC1; FOXK1; FOXN3; FOXN4; FOXO3; FOXO6; FOXP1; FOXP2; GATA2; GATA3; GATAD2B; GCM1; GFI1; GLI4; GSX2; GTF2IRD2; HCFC1; HDAC1; HDAC11; HDAC4; HDAC9; HES1; HES6; HLF; HLTF; HLX; HMGA2; HOXA10; HOXA11; HOXA2; HOXA5; HOXA7; HOXB7; HOXD11; HOXD13; HOXD4; HSF5; ID1; ID2; IKZF4; IL16; ING1; ING4; INSR; IRF4; JARID2; JUND; KAT2B; KAT6A; KAT7; KLF12; KLF15; KMT2B; KMT2D; LCORL; LHX2; LHX6; LMCD1; LOXL2; LYL1; MAFB; MBD4; MECOM; MECP2; MED13; MEF2C; MEF2D; MEIS1; MKL2; MLX; MLXIP; MLXIPL; MTA3; MXD3; MYB; MYCN; MYF6; NANOG; NCOA2; NEUROG3; NFATC1; NFATC2; NFATC3; NFIA; NFRKB; NFXL1; NOBOX; NR1H3; NR2F2; NR3C2; NR4A2; NR5A2; NRF1; OSR2; OTP; PAX3; PAX5; PBX1; PBX2; PBXIP1; PCGF6; PEG3; PEX14; PEX2; PITX1; PKNOX2; PLAG1; PLAGL1; PMS1; POU3F4; POU4F2; POU5F1B; POU6F1; PPARG; PPARGC1B; PRDM13; PRDM16; PRKDC; PROP1; PSIP1; PURB; RBPJL; RFX2; RNF141; RNF6; RXRB; SAFB2; SALL2; SALL4; SAP18; SATB1; SCAI; SIRT2; SLC2A4RG; SMAD7; SMARCA4; SNAI3; SOX11; SOX18; SOX2; SOX21; SOX30; SOX4; SOX8; SP2; SPIB; SPIC; SREBF2; STAT1; STAT4; TADA3; TAF1; TAF11; TBL1XR1; TBX1; TBX18; TBX21; TBX22; TBX5; TCEB2; TCF4; TCF7; TEAD1; TEAD4; TERF2; TFAP2B; TFCP2L1; TFDP1; TFEB; TGFB1; THAP10; TONSL; TOX2; TOX3; TOX4; TRERF1; TSHZ1; TSHZ2; TSHZ3; TUB; TULP4; USF2; VAX2; WNT4; WWTR1; YY1; ZBED6; ZBTB1; ZBTB18; ZBTB44; ZBTB45; ZBTB8A; ZBTB8B; ZFHX4; ZFP2; ZFP36L1; ZFP69; ZFP90; ZHX1; ZHX3; ZIK1; ZKSCAN4; ZKSCAN5; ZKSCAN7; ZMYND8; ZNF10; ZNF17; ZNF180; ZNF215; ZNF222; ZNF226; ZNF229; ZNF232; ZNF233; ZNF234; ZNF248; ZNF25; ZNF26; ZNF268; ZNF287; ZNF292; ZNF30; ZNF324B; ZNF347; ZNF354C; ZNF397; ZNF407; ZNF415; ZNF439; ZNF44; ZNF441; ZNF461; ZNF512B; ZNF519; ZNF521; ZNF536; ZNF544; ZNF554; ZNF555; ZNF571; ZNF575; ZNF577; ZNF599; ZNF600; ZNF606; ZNF613; ZNF614; ZNF616; ZNF627; ZNF639; ZNF652; ZNF653; ZNF672; ZNF680; ZNF687; ZNF700; ZNF705G; ZNF711; ZNF732; ZNF736; ZNF74; ZNF740; ZNF76; ZNF784; ZNF792; ZNF8; ZNF80; ZNF813; ZNF814; ZNF827; ZNF831; ZNF837; ZNF844; ZNF850; ZNF91; ZNF92; ZSCAN31; ZSCAN32