Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04531	Tnfa	GSE9055	Umbilical vein cells	Human	6h	10ng/ml	EID4891

Response Information :

Types	Number	Response transcription factors
Up-regulation	283	AFF3; AJUBA; ALX4; ANHX; ANKRD30A; ARID1A; ARID5A; ARNT; ARNTL2; ATF3; ATF5; ATOH1; BARX1; BATF2; BATF3; BHLHE22; BHLHE41; BRCA2; CARHSP1; CASZ1; CBX2; CCNC; CDYL; CEBPD; CENPF; CHD2; CIITA; CITED4; CNOT2; CREB3; CREB3L2; CTBP2; CTCFL; DAXX; DLX6; DMRT1; DMRT2; DOT1L; DR1; E2F2; E2F5; ELK1; EN1; EN2; ENO1; EPC1; ESRRB; ESRRG; ETS1; ETV7; EYA1; EZH1; FERD3L; FIGLA; FIZ1; FOSB; FOSL1; FOXA2; FOXD1; FOXF1; FOXH1; FOXR2; GATAD2A; GLI2; GLIS1; GRHL3; GRIP1; GSC2; HBP1; HDGF; HDX; HELZ2; HEY1; HEYL; HIPK2; HIVEP2; HMG20B; HNF4A; HOXB1; HOXB8; HOXC10; HOXC12; HOXC5; IKZF2; ING2; ING5; INSM2; IRF1; IRF2; IRF5; IRF9; IRX3; IRX5; ISL2; ISX; JAK2; JUNB; KCTD1; KDM1B; KDM5A; KLF14; KLF17; KLF4; KLF9; L3MBTL4; LEF1; LHX8; LIMD1; LIN28B; LITAF; LZTS1; MAF; MAFG; MAML3; MAPK8IP1; MBD1; MED15; MEOX1; MEOX2; MKL1; MNT; MSX1; MXD1; MYBBP1A; MYCL; MYOCD; MYRF; MYT1; NCOA7; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NOC2L; NR4A1; NR4A3; NR6A1; NRIP1; NUP62; ONECUT3; OTX1; PATZ1; PAX4; PBRM1; PCBD2; PDLIM1; PHF2; PITX2; POU3F1; POU4F1; POU5F2; POU6F1; PPARD; PPARGC1A; PRDM12; PRDM2; PROX1; PRRX1; PYGO2; RARG; RAX2; RELA; RELB; REPIN1; RFX4; RHOA; RORA; RORC; RSF1; RUNX2; RUNX3; RXRG; SALL3; SATB2; SIM2; SIX4; SIX6; SMAD3; SMAD4; SNAPC4; SOX10; SP140L; SP6; SPIC; SRY; SSX1; STAT5A; STAT6; SUFU; TAF1C; TAF4B; TAF6L; TBL1X; TBX5; TCERG1; TCF21; TCF3; TEAD3; TEF; TFAP2C; TFE3; THAP3; TLX3; TONSL; TRIM11; TRIM22; TWIST2; UBTF; URI1; USP22; VDR; VGLL2; VGLL4; VHL; YBX2; ZBED4; ZBTB24; ZBTB26; ZBTB37; ZBTB40; ZBTB47; ZBTB7B; ZEB2; ZFHX2; ZFP69B; ZFY; ZIM3; ZKSCAN3; ZMIZ2; ZMYM2; ZNF165; ZNF254; ZNF286A; ZNF3; ZNF341; ZNF345; ZNF358; ZNF384; ZNF391; ZNF396; ZNF425; ZNF442; ZNF443; ZNF444; ZNF446; ZNF467; ZNF524; ZNF526; ZNF527; ZNF540; ZNF541; ZNF551; ZNF563; ZNF572; ZNF578; ZNF583; ZNF586; ZNF594; ZNF595; ZNF597; ZNF611; ZNF620; ZNF625; ZNF646; ZNF664; ZNF670; ZNF671; ZNF683; ZNF688; ZNF697; ZNF7; ZNF71; ZNF749; ZNF765; ZNF771; ZNF79; ZNF800; ZNF836; ZNF852; ZNF865; ZNF90; ZXDB
Down-regulation	310	ABRA; AFF1; AHR; ALX3; AR; ARID1B; ARID4A; ARX; ASCL3; ASCL5; ATF2; BARX2; BATF; BBX; BCL11A; BCL6B; BCLAF1; BNC2; BPTF; BRDT; BTF3; BTG1; CBL; CBX7; CCAR1; CEBPE; CERS5; CERS6; CHD7; CITED2; CREBZF; CREM; CSDC2; CTBP1; DACH1; DBP; DDX17; DEAF1; DMTF1; EBF3; EED; EGR2; EGR3; EHMT2; ELF5; ELK4; EMX2; EOMES; ERBB2; ERCC2; ERG; FEZF2; FHL2; FLI1; FOXB1; FOXC1; FOXO3; FOXP2; FOXP4; FUBP1; GATA3; GATA5; GFI1; GFI1B; GLI4; GTF2A1L; GTF2I; GTF2IRD2; HDAC6; HDAC9; HES1; HIF3A; HIPK1; HIVEP3; HLF; HLTF; HOXA10; HOXA3; HOXA5; HOXB7; HOXD11; HOXD4; HTATIP2; ID1; ID2; IKBKAP; IKZF1; IKZF4; IL16; ING1; IRF4; IRF6; IRF8; KAT2B; KAT6A; KAT6B; KAT7; KDM4A; KDM5B; KLF15; KMT2C; KMT2D; LCORL; LHX2; LHX6; LHX9; LMCD1; LOXL2; LYL1; MAFB; MDFI; MECP2; MED13; MGA; MIER3; MIXL1; MKL2; MLX; MLXIP; MLXIPL; MNX1; MXD3; MYBL1; MYEF2; MYF6; MYSM1; MYT1L; MZF1; NAB1; NEUROD1; NEUROD4; NEUROG1; NFAT5; NFIA; NFIC; NPAS2; NR1H3; NR2F2; NR3C2; NR5A1; NRF1; OLIG2; ONECUT1; OTP; OTX2; PAXBP1; PBX1; PBX2; PBXIP1; PCGF3; PCGF6; PEX14; PHF12; PITX1; PKNOX2; PMS1; POLR2A; POU5F1B; PPARG; PRDM13; PRDM14; PRDM15; PRDM16; RBAK; RBL2; RNF6; RORB; SALL4; SATB1; SCRT1; SETD2; SETDB1; SIM1; SIN3A; SMAD6; SMAD7; SMARCA4; SNAI1; SNAI3; SOX11; SOX14; SOX15; SOX18; SOX2; SOX5; SOX6; SPIB; STAT1; STAT2; SUB1; SUPT3H; TAF10; TAF7L; TBL1Y; TBX1; TBX19; TBX20; TBX3; TCF15; TCF4; TFDP1; TGFB1; TGIF1; TGIF2LY; THAP10; THAP2; THAP9; THRAP3; TLX1; TOX2; TOX3; TRERF1; TRPS1; TSHZ1; TSHZ2; TUB; UBE2I; UBE3A; USF2; VAX2; WWTR1; YBX3; YY1; ZBED6; ZBTB14; ZBTB18; ZBTB3; ZBTB38; ZBTB44; ZBTB45; ZBTB8A; ZFP14; ZFP2; ZFP36L1; ZFP90; ZHX3; ZIC2; ZKSCAN1; ZKSCAN7; ZMYND8; ZNF10; ZNF100; ZNF101; ZNF117; ZNF154; ZNF174; ZNF175; ZNF208; ZNF214; ZNF229; ZNF233; ZNF234; ZNF250; ZNF268; ZNF30; ZNF354C; ZNF366; ZNF397; ZNF404; ZNF415; ZNF417; ZNF43; ZNF439; ZNF493; ZNF496; ZNF521; ZNF528; ZNF529; ZNF536; ZNF554; ZNF557; ZNF562; ZNF568; ZNF571; ZNF577; ZNF599; ZNF606; ZNF613; ZNF626; ZNF627; ZNF628; ZNF630; ZNF639; ZNF641; ZNF652; ZNF667; ZNF672; ZNF678; ZNF684; ZNF696; ZNF709; ZNF710; ZNF711; ZNF732; ZNF74; ZNF740; ZNF76; ZNF77; ZNF780B; ZNF781; ZNF789; ZNF792; ZNF80; ZNF827; ZNF837; ZNF85; ZNF891; ZNF91; ZSCAN1; ZSCAN12