Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04529	Tnfa	GSE9055	Umbilical vein cells	Human	5h	10ng/ml	EID4889

Response Information :

Types	Number	Response transcription factors
Up-regulation	325	AFF3; AGO2; AJUBA; ALX4; ARID4B; ARID5B; ARL2BP; ARNT; ASCL1; ATF3; ATF5; ATF6; BARHL1; BATF2; BATF3; BAZ1B; BAZ2A; BHLHE22; BHLHE23; BHLHE40; BHLHE41; BRD4; BRDT; CDK2; CDYL; CEBPA; CEBPD; CERS4; CHD2; CITED4; CREB3; CREB3L1; CREB3L2; CREB3L3; CTBP2; CTCFL; DACH2; DLX1; DMRT1; DMRT2; DMRTB1; DR1; E2F5; EHF; ELK1; EN2; ENO1; EPC1; ESRRB; ESRRG; ETS1; ETV7; EVX1; EZH1; FERD3L; FIGLA; FOSL1; FOXD2; FOXE1; FOXF1; FOXH1; FOXL2; FOXR1; FOXR2; GABPB1; GLI2; GLI4; GRHL3; GRIP1; HABP4; HDAC10; HDAC9; HDGF; HDX; HELZ2; HEY1; HEYL; HIVEP2; HMGB4; HMX2; HNRNPD; HOXB1; HOXC12; HOXC13; HOXC9; HOXD10; HOXD9; HR; ID4; IKZF2; ING5; INSM1; IRF1; IRF2; IRF5; IRF9; IRX3; JAK2; JUNB; KCTD1; KLF14; KLF3; KLF6; KLF7; KLF8; KLF9; L3MBTL4; LEF1; LHX1; LHX8; LITAF; LMO1; LZTS1; MAF; MAK; MAP3K10; MAPK8IP1; MBD1; MDM2; MEOX1; MITF; MKL1; MKX; MNDA; MNT; MSC; MSX1; MSX2; MTA2; MYC; MYRF; MYT1; NAB2; NCOA7; NEUROD4; NFIX; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NPAS2; NPAT; NR4A1; NR4A3; NR6A1; NRIP1; ONECUT2; ONECUT3; OSR2; OVOL1; PATZ1; PAX4; PAX6; PCBD2; PCGF1; PDLIM1; PHF1; PHF2; PIAS2; PITX2; PML; POU2F2; POU2F3; POU3F1; POU4F1; POU5F2; PPARD; PRDM1; PRDM12; PRDM15; PRDM2; PRDM7; PROX1; PROX2; PRRX1; PRRX2; PYGO2; RARG; RAX2; RBPMS; RELA; RELB; REPIN1; RFX4; RHOA; RNF6; RSF1; RXRG; SALL3; SATB2; SIAH2; SIRT2; SIX6; SKIL; SMAD3; SMAD9; SMARCA1; SNAPC4; SOX1; SOX6; SP140L; SP6; SP8; SRCAP; SRF; STAT5A; STAT6; SUFU; TADA2A; TAF4B; TAF6L; TAL2; TBL1X; TBR1; TBX3; TBX4; TCEA1; TCEA2; TCF24; TCF3; TEAD3; TFAP2A; TFAP2C; TFE3; THRA; THRAP3; TLX2; TLX3; TP53; TRAK1; TRIB3; TRIM11; TRIM22; TWIST2; UBE2B; UBTF; VDR; VGLL1; VGLL2; VGLL4; VHL; VSX1; WIZ; WT1; YBX2; ZBED2; ZBED4; ZBTB37; ZBTB40; ZBTB42; ZBTB47; ZBTB7B; ZFHX2; ZFP1; ZFP69B; ZFY; ZHX3; ZIC3; ZIC4; ZMIZ1; ZMIZ2; ZMYM2; ZNF107; ZNF160; ZNF19; ZNF214; ZNF235; ZNF254; ZNF257; ZNF286A; ZNF334; ZNF335; ZNF345; ZNF362; ZNF366; ZNF384; ZNF407; ZNF425; ZNF442; ZNF443; ZNF444; ZNF446; ZNF483; ZNF484; ZNF524; ZNF527; ZNF541; ZNF543; ZNF550; ZNF551; ZNF557; ZNF563; ZNF568; ZNF572; ZNF578; ZNF583; ZNF585B; ZNF620; ZNF621; ZNF625; ZNF628; ZNF646; ZNF664; ZNF668; ZNF670; ZNF671; ZNF674; ZNF683; ZNF688; ZNF697; ZNF705G; ZNF71; ZNF713; ZNF749; ZNF771; ZNF777; ZNF79; ZNF800; ZNF852; ZNF853; ZSCAN10; ZSCAN4; ZXDA; ZXDB
Down-regulation	326	ADRB2; AHR; ALX1; AR; ARID1B; ARID2; ARID4A; ASCL3; ATOH7; BACH1; BARX2; BATF; BNC2; BPTF; BRCA1; BRD3; BTF3; C1D; CBX2; CBX7; CNOT3; CREM; CTBP1; CUX2; DACH1; DCC; DDX54; DEAF1; DTX1; E2F8; EBF3; EED; EGR2; ELF5; ELK3; EP400; ERBB4; ESR1; ESRRA; ETV1; FHL2; FIZ1; FLI1; FOS; FOXA1; FOXC1; FOXJ1; FOXM1; FOXO1; FOXO3; FOXO6; FOXP1; FOXP2; FOXP3; FOXP4; FUBP1; GATA1; GATA2; GATA3; GATA5; GCM1; GFI1B; GLI3; GLIS1; GMEB1; HDAC4; HES1; HES6; HIPK3; HIVEP3; HLF; HLTF; HMGA2; HOXA10; HOXA11; HOXA2; HOXA4; HOXA5; HOXA7; HOXB5; HOXB6; HOXB7; HOXD4; HOXD8; ID1; ID2; IFI16; IL16; ING1; KAT2B; KAT6A; KAT7; KDM4A; KDM5B; KLF12; KLF15; KLF17; KLF5; KMT2C; KMT2D; LCORL; LHX4; LHX5; LHX6; LHX9; LIN28B; LMCD1; LOXL2; LYL1; MAFB; MDFI; MECOM; MED13; MED27; MEF2C; MEIS3; MIXL1; MKL2; MLLT10; MLXIP; MLXIPL; MTA3; MXD3; MYB; MYBL1; MYEF2; MYRFL; NACA; NANOG; NCOA6; NEUROG1; NFATC3; NFIA; NFIC; NOBOX; NPAS4; NR0B1; NR1H3; NR2F2; NR2F6; NR3C2; NR4A2; NR5A1; NR5A2; NRF1; OTP; PAX2; PAX5; PAX8; PBX1; PBX2; PBX3; PBXIP1; PCGF5; PEX2; PHIP; PIAS4; PITX1; PKNOX2; PLAG1; PLAGL1; PMS1; POLR2A; POU6F1; PPARG; PPARGC1B; PRKDC; PSIP1; RARB; RBL1; RCOR3; RFX2; RFX6; RORA; SAFB2; SALL2; SATB1; SETDB1; SETDB2; SIN3A; SIX2; SLC2A4RG; SMAD6; SMAD7; SMARCA4; SMARCB1; SMARCC2; SMARCD3; SOX11; SOX14; SOX18; SOX21; SOX30; SP1; SP2; SSBP2; STAT1; STAT4; SUZ12; TADA3; TAF11; TAL1; TBL1XR1; TBX1; TBX18; TBX19; TBX20; TBX21; TBX22; TCEB2; TCERG1; TCF15; TDRD3; TEAD1; TEF; TERF2; TFAP4; TFEB; TGS1; THAP10; THAP11; TLE1; TONSL; TOX2; TP73; TRERF1; TRIM29; TRIM33; TSC22D3; TSHZ1; TSHZ2; TUB; TULP1; TULP4; UBE3A; UTF1; VAX2; WNT4; WWC1; YY1; ZBED6; ZBTB14; ZBTB20; ZBTB45; ZFHX4; ZFP14; ZFP30; ZFP36L1; ZFP69; ZFPM1; ZHX1; ZIC2; ZKSCAN1; ZMYND8; ZNF10; ZNF101; ZNF148; ZNF154; ZNF157; ZNF16; ZNF17; ZNF175; ZNF18; ZNF208; ZNF215; ZNF225; ZNF233; ZNF248; ZNF250; ZNF268; ZNF30; ZNF311; ZNF32; ZNF333; ZNF33B; ZNF354C; ZNF382; ZNF404; ZNF41; ZNF415; ZNF439; ZNF461; ZNF490; ZNF500; ZNF512B; ZNF519; ZNF521; ZNF528; ZNF544; ZNF554; ZNF555; ZNF571; ZNF575; ZNF577; ZNF579; ZNF597; ZNF599; ZNF600; ZNF607; ZNF613; ZNF614; ZNF652; ZNF653; ZNF672; ZNF684; ZNF687; ZNF7; ZNF700; ZNF709; ZNF717; ZNF74; ZNF75D; ZNF76; ZNF763; ZNF77; ZNF770; ZNF780A; ZNF780B; ZNF782; ZNF789; ZNF792; ZNF8; ZNF814; ZNF827; ZNF831; ZSCAN9