Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04528	Tnfa	GSE9055	Umbilical vein cells	Human	4.5h	10ng/ml	EID4888

Response Information :

Types	Number	Response transcription factors
Up-regulation	301	AFF3; ANHX; ARID5A; ARNT; ARNTL2; ASCL1; ATF3; ATF5; ATF6; ATN1; ATOH1; BARX1; BATF2; BATF3; BCL11B; BCL6; BHLHE22; BHLHE23; BHLHE41; BIRC2; BLZF1; BRD4; BRD8; CARHSP1; CASZ1; CBX2; CBX5; CCNC; CDK2; CDK9; CDYL; CEBPA; CEBPD; CHD2; CITED4; CNOT2; CREB3; CRYM; CTBP2; CTCFL; DAXX; DMRT2; DR1; E2F2; E2F5; EGR4; EHF; ELK1; ELK4; EMX1; EN2; ENO1; EPC1; ERBB2; ESRRB; ESRRG; ETS1; ETV7; EZH1; FERD3L; FIGLA; FOSL1; FOXA1; FOXD2; FOXD3; FOXF1; FOXN1; GBX1; GLI1; GLI2; GMEB1; GRIP1; HABP4; HBP1; HDAC5; HDGF; HDX; HELZ2; HES2; HES4; HES5; HESX1; HEY1; HEYL; HIPK2; HIVEP2; HMG20B; HMGB4; HMX2; HNF4A; HNRNPD; HOXC12; HOXC9; HOXD10; HR; ID4; IKZF3; ING5; INSM1; INSM2; IRF1; IRF2; IRF5; IRF8; IRF9; IRX3; IRX4; IRX5; JAK2; JUNB; KCNIP3; KCTD1; KDM2A; KDM5A; KLF13; KLF14; KLF8; KLF9; L3MBTL4; LEF1; LHX8; LIMD1; LIN28A; LITAF; LMO1; MAEL; MAFF; MAFG; MAK; MAML3; MAPK8IP1; MBD1; MED30; MITF; MNDA; MNT; MSX1; MSX2; MTA2; MYB; MYF6; MYOCD; MYRF; MYT1; NCOA7; NCOR1; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFX1; NFYA; NHLH2; NPAS2; NPAT; NR1H4; NR4A3; NR6A1; NUP62; OLIG3; ONECUT3; OVOL1; PAX4; PBRM1; PCBD2; PCGF1; PDLIM1; PHF1; POU1F1; POU2F1; POU2F2; POU3F1; POU5F2; PPARD; PQBP1; PRDM10; PRDM15; PRRX1; RARA; RARG; RAX2; RELA; RELB; REPIN1; RHOA; RSF1; SALL3; SCRT1; SERTAD2; SETD7; SHOX2; SIAH2; SIM2; SIX6; SMAD3; SMAD4; SNAPC4; SOX5; SOX6; SP140L; SP8; SREBF1; SSX3; STAT2; STAT5A; STAT6; TAF1C; TAF4B; TAF6L; TAL2; TBX2; TCF24; TEAD3; TFAP2D; TFDP2; TFE3; THRB; TLX2; TRIM11; TWIST2; UBE2B; URI1; VDR; VGLL1; VGLL2; VGLL4; VHL; VSX1; WIZ; YBX1; ZBED2; ZBED4; ZBTB24; ZBTB37; ZBTB42; ZBTB47; ZBTB7B; ZFHX2; ZFHX3; ZFP57; ZFP69B; ZFY; ZIC1; ZIC4; ZIC5; ZMIZ2; ZMYM2; ZNF138; ZNF160; ZNF19; ZNF202; ZNF235; ZNF254; ZNF275; ZNF286A; ZNF292; ZNF296; ZNF324; ZNF334; ZNF335; ZNF341; ZNF345; ZNF366; ZNF384; ZNF391; ZNF407; ZNF416; ZNF425; ZNF444; ZNF446; ZNF526; ZNF541; ZNF543; ZNF550; ZNF563; ZNF567; ZNF572; ZNF583; ZNF584; ZNF597; ZNF605; ZNF620; ZNF621; ZNF625; ZNF646; ZNF664; ZNF671; ZNF697; ZNF705G; ZNF71; ZNF713; ZNF749; ZNF765; ZNF79; ZNF800; ZNF836; ZNF852; ZNF90; ZSCAN20; ZSCAN25; ZXDB
Down-regulation	366	ABRA; AFF1; AHR; ALX1; ALX3; AR; ARID1B; ARID3B; ARID4A; ARID5B; ASCL5; ATF2; ATF7; BARX2; BATF; BBX; BCL11A; BPTF; BRCA1; BTF3; CAPN15; CBL; CBX7; CCAR1; CCNE1; CDX4; CEBPE; CERS5; CERS6; CHD7; CREBZF; CSDC2; CUX2; DACH1; DDX17; DEAF1; DLX4; DMRTC2; DYRK1B; E2F8; EBF1; EBF3; EGR2; EHMT2; ELF5; ELK3; EMX2; EPAS1; ERBB4; ERCC2; ERG; ESR1; ESR2; ESRRA; ETV1; ETV5; EYA3; FEZF2; FHL2; FIZ1; FOS; FOSL2; FOXA3; FOXB1; FOXC1; FOXJ1; FOXJ2; FOXO1; FOXO3; FOXO6; FOXP2; FOXS1; GATA1; GATA2; GATA3; GATA5; GFI1B; GTF2A1; GTF2I; HCFC1; HDAC6; HES1; HES6; HIC1; HIPK1; HIPK3; HIRA; HLF; HLTF; HOXA10; HOXA11; HOXA2; HOXA3; HOXA5; HOXA7; HOXB6; HOXB7; HOXD11; HOXD4; HOXD8; HSF2; HSF5; ID1; ID2; IKZF4; IL16; ING1; ING4; JARID2; JDP2; KAT2B; KAT6B; KAT7; KDM5B; KLF15; KMT2B; KMT2C; KMT2D; L3MBTL1; LCORL; LHX2; LHX3; LHX4; LHX6; LIN28B; LMCD1; LOXL2; LYL1; MAFB; MBD3; MDFI; MDM4; MECOM; MED12; MEF2D; MEIS3; MIXL1; MKL2; MLLT10; MLXIP; MLXIPL; MNX1; MTA3; MYOD1; NANOG; NCOA6; NEUROG1; NEUROG3; NFAT5; NFATC2; NFATC3; NFIA; NFIB; NFIX; NFRKB; NFYC; NR1H3; NR1I3; NR2F2; NR2F6; NR3C2; NR5A1; OLIG2; ORC2; OTX2; PAX2; PAX5; PAX7; PAX8; PAX9; PAXBP1; PBX2; PBX3; PBXIP1; PCGF6; PEX14; PHF12; PHIP; PHOX2A; PITX1; PLAG1; POU3F3; POU4F2; POU5F1B; PPARG; PPARGC1B; PRDM13; PRDM16; PRKDC; PROP1; PURB; RARB; RB1; RBL2; RBM14; RBPJL; RCOR3; RERE; REST; RFX2; RFX6; RFX7; RNF6; RUNX2; RXRG; SALL4; SAP30; SATB1; SETD2; SETDB2; SIN3A; SIX1; SIX2; SMAD2; SMAD6; SMAD7; SMARCA4; SMARCB1; SMARCC2; SNAI3; SOX11; SOX12; SOX14; SOX15; SOX18; SOX2; SOX21; SOX30; SP1; SP4; SP7; SPDEF; SPIB; SPIC; SREBF2; STAT1; STAT4; SUB1; SUPT3H; TAF1; TAF11; TBL1XR1; TBX1; TBX19; TBX21; TCEA2; TCEB2; TCF12; TCF20; TDRD3; TEAD4; TEF; TFEB; THAP10; THAP11; THAP2; THAP9; TOB1; TOX2; TOX3; TP73; TRERF1; TSC22D1; TSC22D3; TSC22D4; TSHZ1; TSHZ3; TULP4; TWIST1; TXNIP; UTF1; VAX2; WNT4; WWC1; WWTR1; YBX3; YY1; ZBTB14; ZBTB18; ZBTB38; ZBTB44; ZBTB45; ZBTB6; ZBTB7A; ZFP2; ZFP30; ZFP36L1; ZFP41; ZFP64; ZFP90; ZFPM1; ZHX1; ZHX2; ZHX3; ZKSCAN7; ZNF10; ZNF124; ZNF154; ZNF169; ZNF224; ZNF233; ZNF236; ZNF248; ZNF26; ZNF268; ZNF287; ZNF30; ZNF324B; ZNF347; ZNF354C; ZNF382; ZNF397; ZNF41; ZNF417; ZNF418; ZNF431; ZNF439; ZNF440; ZNF441; ZNF449; ZNF480; ZNF490; ZNF517; ZNF519; ZNF521; ZNF528; ZNF544; ZNF547; ZNF551; ZNF554; ZNF562; ZNF568; ZNF577; ZNF599; ZNF600; ZNF607; ZNF613; ZNF614; ZNF623; ZNF624; ZNF641; ZNF652; ZNF672; ZNF674; ZNF675; ZNF681; ZNF684; ZNF687; ZNF710; ZNF711; ZNF717; ZNF732; ZNF74; ZNF740; ZNF746; ZNF763; ZNF770; ZNF780B; ZNF789; ZNF792; ZNF814; ZNF837; ZNF85; ZNF880; ZNF92; ZSCAN31