Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04527	Tnfa	GSE9055	Umbilical vein cells	Human	4h	10ng/ml	EID4887

Response Information :

Types	Number	Response transcription factors
Up-regulation	309	AFF3; AIRE; AJUBA; ANHX; ARID3B; ARID5A; ARID5B; ARNT; ARNTL2; ARRB1; ASCL1; ATF3; ATF5; ATN1; ATOH1; BATF2; BATF3; BAZ1B; BCL11B; BCL9L; BHLHE23; BHLHE40; BHLHE41; BIRC2; CAMTA1; CBX2; CCNC; CDC5L; CDK2; CDK8; CDYL; CEBPD; CENPF; CERS3; CITED4; CNOT2; CREB3; CREB3L1; CREB3L2; CRTC1; CTCFL; DLX1; DLX2; DOT1L; DR1; E2F1; E2F5; EBF2; EGR4; EHF; ELK1; EMX1; EN2; ENO1; EPC1; ERBB2; ESRRA; ESRRB; ESRRG; ETS1; ETV7; EYA1; FERD3L; FHL5; FIGLA; FOSL1; FOXA2; FOXD1; FOXD2; FOXE1; FOXF1; FOXH1; FOXK1; FOXN1; FOXO4; FOXP1; FOXR2; GABPB1; GATA4; GBX2; GLI2; GLI4; GLIS1; GMEB1; GRHL3; GRIP1; HBP1; HDGF; HDX; HELZ2; HES2; HES6; HEY1; HEY2; HEYL; HIPK2; HIVEP2; HMG20B; HMX2; HNF1B; HNF4A; HOXB1; HOXB8; HOXC5; HOXC9; HOXD9; HR; ID4; IKZF2; ING5; INSM1; INSM2; IRF1; IRF2; IRX3; ISL1; JAK2; JUNB; KCNIP3; KCTD1; KDM5A; KLF14; KLF4; KLF6; KLF9; LEF1; LIMD1; LITAF; LMO1; LMX1A; LZTS1; MAEL; MAFF; MAML3; MAPK8IP1; MBD1; MDM4; MED26; MEOX1; MESP1; MKX; MNDA; MNX1; MSC; MSX1; MYT1; NAB1; NAB2; NCOA7; NEUROD6; NFKB1; NFKB2; NFKBIA; NFKBIZ; NPAS2; NPAT; NR1I2; NR4A1; NRIP1; NRL; NUP62; ONECUT2; ONECUT3; OSR2; OTX1; OVOL1; PBRM1; PCBD2; PCGF1; PDLIM1; PDX1; PEG3; PHF2; PIAS2; PITX2; PITX3; POU2F1; POU2F2; POU4F1; POU5F2; PPARA; PPARD; PRDM1; PRDM2; PRDM6; PRDM7; PROX1; PRRX1; RARG; RAX2; RBL1; RBPMS; RELA; RELB; REPIN1; RFX4; RHOA; RSF1; SALL1; SALL3; SERTAD2; SIAH2; SIX3; SKIL; SMAD3; SMARCA1; SNAPC4; SOX10; SOX13; SRCAP; SREBF1; SSX1; STAT5A; STAT6; SUFU; TADA1; TADA2A; TADA3; TAF1C; TAF4B; TAF6L; TBL1X; TEAD3; TEF; TFAP2C; TFE3; THAP9; THRB; TLX2; TLX3; TULP2; TWIST2; UBTF; URI1; UTF1; VDR; VHL; WIZ; WWC1; YBX2; ZBED4; ZBTB24; ZBTB37; ZBTB47; ZBTB7B; ZEB2; ZFP1; ZFP69B; ZFPM2; ZGLP1; ZHX3; ZIC1; ZIC4; ZMIZ2; ZMYM2; ZNF165; ZNF19; ZNF235; ZNF254; ZNF257; ZNF286A; ZNF292; ZNF3; ZNF334; ZNF335; ZNF345; ZNF384; ZNF391; ZNF407; ZNF429; ZNF443; ZNF444; ZNF446; ZNF526; ZNF527; ZNF530; ZNF540; ZNF543; ZNF544; ZNF549; ZNF550; ZNF563; ZNF578; ZNF583; ZNF584; ZNF594; ZNF595; ZNF597; ZNF605; ZNF613; ZNF620; ZNF621; ZNF625; ZNF664; ZNF678; ZNF683; ZNF688; ZNF697; ZNF71; ZNF749; ZNF771; ZNF787; ZNF80; ZNF800; ZNF81; ZNF852; ZNF90; ZSCAN20; ZXDB
Down-regulation	352	AFF1; AHR; ALX1; ALX3; AR; ARID1B; ARID2; ARID4A; ARX; ASCL5; ATF7; ATOH7; BACH1; BATF; BBX; BCL11A; BCLAF1; BRWD1; BTG1; CARF; CASZ1; CBFA2T3; CBL; CCAR1; CCNE1; CEBPE; CERS6; CREBZF; DACH1; DCC; DMBX1; DMRT3; E2F8; EBF1; EBF3; EED; EGR2; EHMT2; EID1; ELF3; EMX2; ERF; ESR1; ESX1; ETV1; ETV4; ETV5; FEZF2; FHL2; FOXC1; FOXN4; FOXO1; FOXO3; FOXP2; FOXP4; FUBP1; GATA2; GATA3; GATA5; GCM1; GFI1B; GLIS3; GRHL1; GSX1; GSX2; GTF2A2; HDAC11; HDAC4; HDAC7; HES1; HIC1; HIC2; HIPK1; HIRA; HIVEP3; HLF; HLTF; HMGA2; HOXA10; HOXA11; HOXA3; HOXA5; HOXA7; HOXB5; HOXD13; HOXD4; ID1; ID2; IKZF1; IKZF4; IL16; ING1; ING3; INSR; KAT2B; KAT6B; KAT7; KDM4A; KDM4C; KLF12; KLF15; KMT2A; KMT2B; KMT2C; KMT2D; L3MBTL1; LCORL; LHX4; LHX6; LIN54; LMCD1; LOXL2; LYL1; MAFB; MAFK; MDFI; MDM2; MED13; MED27; MED31; MEF2C; MGA; MKL2; MLXIP; MTA3; MXD3; MYBL1; MYEF2; NANOG; NCOA6; NEUROD2; NFAT5; NFIA; NFIB; NFX1; NR1H4; NR1I3; NR2C1; NR2F2; NR2F6; NR3C1; NR3C2; NR4A2; NR5A1; ORC2; OVOL2; PAX3; PAX7; PAX8; PAX9; PAXBP1; PBXIP1; PCGF5; PCGF6; PHF8; PHIP; PHOX2B; PITX1; PLAG1; PLAGL1; POU5F1B; POU6F1; PPARG; PRDM13; PRDM16; PRDM5; PRKDC; PURA; RARA; RBPJ; RFX2; RIPK3; RNF6; RORB; RUNX2; SALL4; SAP18; SAP30; SATB1; SCAI; SETDB2; SIM1; SIN3B; SIX1; SIX2; SMAD2; SMAD7; SMAD9; SMARCD3; SOHLH2; SOX11; SOX14; SOX15; SOX18; SOX2; SOX3; SOX8; SP4; SP6; SP7; SPIC; STAT2; STAT4; STAT5B; SUB1; SUZ12; TAF10; TAF5; TAF7L; TAL1; TBL1XR1; TBX1; TBX18; TBX20; TBX21; TBX22; TCEB2; TCF12; TCF15; TFAP2B; TFAP2E; TFAP4; TGS1; THAP10; THAP6; TONSL; TOX2; TOX3; TP63; TRERF1; TRIM29; TRPS1; TSC22D4; TSHZ1; TSHZ2; TTF2; TUB; TULP1; TXNIP; USF2; USP21; VAX2; WNT4; YY1; ZBED6; ZBTB16; ZBTB18; ZBTB20; ZBTB25; ZBTB3; ZBTB41; ZBTB45; ZBTB6; ZBTB7A; ZFHX3; ZFP14; ZFP30; ZFP36L1; ZFP41; ZFPM1; ZHX1; ZHX2; ZKSCAN1; ZKSCAN3; ZKSCAN5; ZKSCAN7; ZMIZ1; ZMYND8; ZNF114; ZNF124; ZNF135; ZNF141; ZNF154; ZNF174; ZNF205; ZNF208; ZNF214; ZNF215; ZNF225; ZNF226; ZNF233; ZNF234; ZNF24; ZNF248; ZNF250; ZNF253; ZNF287; ZNF30; ZNF32; ZNF324B; ZNF343; ZNF347; ZNF354C; ZNF367; ZNF397; ZNF404; ZNF41; ZNF415; ZNF439; ZNF449; ZNF461; ZNF485; ZNF493; ZNF517; ZNF519; ZNF521; ZNF528; ZNF529; ZNF536; ZNF554; ZNF562; ZNF568; ZNF571; ZNF575; ZNF577; ZNF589; ZNF599; ZNF607; ZNF614; ZNF639; ZNF641; ZNF652; ZNF653; ZNF655; ZNF662; ZNF667; ZNF675; ZNF677; ZNF680; ZNF682; ZNF696; ZNF7; ZNF70; ZNF700; ZNF710; ZNF711; ZNF74; ZNF75D; ZNF76; ZNF777; ZNF782; ZNF789; ZNF792; ZNF8; ZNF814; ZNF844; ZNF891; ZNF91; ZNF92; ZSCAN23; ZSCAN30; ZSCAN31