Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04526	Tnfa	GSE9055	Umbilical vein cells	Human	3.75h	10ng/ml	EID4886

Response Information :

Types	Number	Response transcription factors
Up-regulation	334	AFF3; AIRE; ALX4; ARNT; ARNTL2; ATF3; ATF5; ATF6B; ATF7; ATN1; ATOH1; BARX1; BATF3; BAZ2A; BCL11B; BCL9L; BCOR; BDP1; BHLHE23; BHLHE41; BIRC2; BRD4; CASZ1; CBX2; CCNC; CCNE1; CDYL; CEBPD; CECR2; CERS4; CHD2; CIITA; CITED4; CLOCK; CNOT2; CREB3; CREB3L1; CREB3L2; DACH2; DBP; DLX2; DLX5; DMRT1; DMRT2; DMRTC2; DNAJC2; DOT1L; E2F2; E2F5; E2F7; EBF2; EGR4; ELK1; EN1; ENO1; EPC1; ERBB2; ESRRB; ESRRG; ESX1; ETS1; EYA1; EYA2; FERD3L; FEZF2; FIZ1; FOSL1; FOXA2; FOXA3; FOXD3; FOXF1; FOXL1; FOXN1; FOXR2; GABPB1; GATAD2A; GBX2; GCM1; GMEB1; GRIP1; GSC2; HAND2; HDGF; HDX; HELZ2; HES5; HEY1; HEYL; HIVEP2; HKR1; HMGA1; HMX1; HMX2; HNF1B; HNF4A; HOXB8; HOXC12; HOXC5; HOXC9; HOXD1; HOXD10; HSF5; ID4; IKZF2; IL31RA; ING5; INSM1; IRF1; IRF2; IRF5; IRF9; IRX2; IRX3; IRX5; JAK2; JUNB; KCNIP3; KCTD1; KDM1B; KDM5A; KLF13; KLF14; KLF17; KLF4; KLF6; KLF7; KLF9; L3MBTL4; LHX8; LIN28A; LMO1; LMX1A; LMX1B; LZTS1; MAEL; MAF; MAP3K10; MBD1; MED15; MED30; MEOX1; MESP1; MKL1; MNDA; MNT; MSX1; MSX2; MYBBP1A; MYCL; MYF6; MYOCD; MYRFL; MYT1; NAB1; NCOA7; NEUROG3; NFATC1; NFE2; NFE2L2; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NFYC; NHLH1; NOC2L; NPAS2; NPAT; NR0B1; NR4A3; NR6A1; NRIP1; NUP62; ONECUT2; ONECUT3; OSR2; OTX1; OVOL1; PATZ1; PAX4; PAX6; PBRM1; PHF1; PHF2; PIAS2; POLR2A; POU2F3; POU3F1; POU4F1; POU4F3; POU5F2; PPARGC1A; PPARGC1B; PQBP1; PRDM1; PRDM12; PRDM2; PRKDC; PROX1; PROX2; PRRX1; PURA; RARA; RARG; RAX2; RBPMS; RELA; RELB; REPIN1; RHOA; RHOXF1; RREB1; RSF1; RXRB; SALL1; SALL3; SATB2; SCRT1; SIX1; SIX4; SIX6; SMAD3; SMAD4; SNAI2; SNAPC4; SOHLH2; SOX1; SOX11; SOX13; SOX6; SP140L; SP2; SRCAP; SRF; SRY; SSX3; ST18; STAT5A; SUFU; TAF1L; TAF4B; TAF6L; TBL1Y; TBX2; TBX4; TBX5; TBX6; TCF21; TCF24; TEAD3; TERF2; TFAP2A; TFDP2; TFE3; THRA; TLX2; TSC22D1; TWIST2; UBTF; URI1; USP22; VDR; VGLL2; VGLL4; VHL; WIZ; WT1; XRCC6; YBX3; ZBED4; ZBTB24; ZBTB26; ZBTB32; ZBTB37; ZBTB40; ZBTB42; ZBTB43; ZBTB47; ZFP1; ZFP42; ZFP69B; ZFPM2; ZFY; ZHX3; ZIC4; ZIC5; ZKSCAN3; ZMIZ2; ZNF107; ZNF180; ZNF214; ZNF235; ZNF254; ZNF257; ZNF286A; ZNF292; ZNF296; ZNF333; ZNF334; ZNF335; ZNF350; ZNF384; ZNF391; ZNF443; ZNF446; ZNF467; ZNF526; ZNF527; ZNF530; ZNF543; ZNF550; ZNF551; ZNF563; ZNF567; ZNF578; ZNF583; ZNF584; ZNF585B; ZNF597; ZNF625; ZNF646; ZNF664; ZNF683; ZNF688; ZNF697; ZNF705G; ZNF71; ZNF749; ZNF787; ZNF800; ZNF829; ZNF90; ZXDB
Down-regulation	313	AFF1; ALX1; ARID2; ARID4A; ATF2; ATOH7; BARX2; BBX; BCLAF1; BLZF1; BPTF; BRCA1; BRD3; BRDT; BTG1; CAMTA1; CARF; CBX5; CBX8; CCAR1; CERS3; CERS6; CNOT3; CREBZF; CREM; CRYM; CSDC2; CUX2; DACH1; DCC; DLX4; DMTF1; DTX1; E2F8; EBF3; EGR2; EID1; ERBB4; ERF; ESR1; ESR2; ETS2; ETV1; FHL2; FOXC1; FOXJ2; FOXL2; FOXN4; FOXO1; FOXP2; FOXP4; FOXQ1; FUBP1; GATA3; GATA5; GATA6; GFI1B; GLI1; GON4L; GSX1; GTF2A1; GTF2IRD2; GZF1; HAND1; HCFC1; HDAC4; HDAC6; HES1; HES7; HIC2; HIF3A; HIPK1; HIRA; HIVEP3; HLF; HLTF; HNF4G; HOXA10; HOXA11; HOXA5; HOXC11; HOXD4; ID1; ID2; IKZF4; IRF4; JDP2; KAT2B; KDM5B; KLF15; KMT2D; LCORL; LDB1; LHX2; LHX6; LMCD1; LYL1; MAFB; MBD2; MDM2; MECOM; MED12; MEF2C; MIXL1; MLX; MLXIPL; MTA3; MYBL1; MYEF2; NCOA6; NEUROD4; NEUROG1; NFIA; NFX1; NR2F2; NR3C2; NR4A2; NR5A2; NRF1; NSD1; ORC2; OTX2; PAX2; PAX3; PAX5; PAX8; PAXBP1; PBXIP1; PHF12; PHOX2A; PITX1; PKNOX1; PLAG1; PLAGL1; POU3F2; POU3F3; PPARG; PRDM14; PRDM16; PROP1; PSIP1; RBBP4; RBM14; RBPJL; REL; RFX2; RFX3; RORB; RXRG; RYBP; SAFB2; SALL4; SAP18; SATB1; SETDB2; SIM1; SIX2; SLC2A4RG; SMAD7; SMAD9; SMARCB1; SNAI1; SNAI3; SOX14; SOX18; SOX2; SOX3; SP8; SPDEF; STAT1; STAT4; STAT5B; SUPT3H; TAF11; TAL1; TBL1XR1; TBX1; TBX18; TBX22; TCEB2; TCERG1; TCF12; TCF15; TFAP2B; TFCP2L1; TFEB; TGS1; THAP10; THAP2; THAP6; TOB1; TONSL; TOX2; TOX3; TRERF1; TSC22D3; TSHZ1; TSHZ2; TSHZ3; TULP4; TXNIP; UBE2I; UBE3A; USF2; UTF1; WHSC1; WNT4; WWP1; YY1; ZBED6; ZBTB14; ZBTB16; ZBTB2; ZBTB41; ZBTB44; ZBTB7A; ZBTB8B; ZFP2; ZFP3; ZFP36L1; ZFP41; ZFP69; ZFP90; ZFPM1; ZHX1; ZHX2; ZIC2; ZIK1; ZKSCAN1; ZMIZ1; ZMYND8; ZNF10; ZNF141; ZNF174; ZNF215; ZNF23; ZNF233; ZNF236; ZNF24; ZNF248; ZNF25; ZNF250; ZNF251; ZNF268; ZNF28; ZNF30; ZNF311; ZNF320; ZNF324B; ZNF347; ZNF397; ZNF398; ZNF404; ZNF407; ZNF408; ZNF415; ZNF420; ZNF431; ZNF439; ZNF44; ZNF441; ZNF512B; ZNF519; ZNF521; ZNF528; ZNF529; ZNF544; ZNF546; ZNF554; ZNF555; ZNF557; ZNF562; ZNF575; ZNF594; ZNF599; ZNF600; ZNF610; ZNF611; ZNF613; ZNF614; ZNF626; ZNF627; ZNF630; ZNF641; ZNF652; ZNF655; ZNF667; ZNF677; ZNF680; ZNF696; ZNF70; ZNF700; ZNF711; ZNF721; ZNF732; ZNF736; ZNF74; ZNF740; ZNF76; ZNF763; ZNF770; ZNF780B; ZNF781; ZNF782; ZNF784; ZNF792; ZNF81; ZNF844; ZNF85; ZNF850; ZNF865; ZNF91; ZSCAN12