Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04523	Tnfa	GSE9055	Umbilical vein cells	Human	3h	10ng/ml	EID4883

Response Information :

Types	Number	Response transcription factors
Up-regulation	324	AEBP2; AFF2; AJUBA; ALX4; ARID1A; ARID4B; ARID5A; ARNT; ARNTL2; ASCL2; ATF3; ATF5; ATN1; ATOH1; BARX1; BASP1; BATF2; BATF3; BAZ1B; BCL11A; BCL9L; BCOR; BHLHE22; BHLHE23; BHLHE40; BHLHE41; BIRC2; BTG1; CASZ1; CBFB; CD3D; CDK2; CDK8; CDYL; CEBPD; CENPF; CHD2; CHD6; CIITA; CITED4; CNOT2; CREB3; CREB3L1; CREB3L2; CTBP2; CTCFL; DLX1; DLX3; DLX5; DLX6; DNAJC2; E2F1; E2F5; EHF; ELK1; EN2; EPC1; ERBB2; ESRRG; ESX1; ETS1; ETV3; EVX1; EYA1; FERD3L; FOS; FOXA2; FOXD1; FOXD2; FOXD3; FOXF1; FOXN1; GABPB1; GATA4; GATAD2A; GBX2; GCM2; GLI2; GLI4; GLIS1; GRIP1; HAND2; HDAC10; HDX; HELZ2; HES4; HEY1; HEYL; HIPK2; HIVEP2; HMX1; HNF1B; HNF4A; HNRNPD; HOXB8; HOXC12; HOXC9; HOXD10; HSF5; ID4; IKZF3; IL31RA; ING5; INSM1; INSM2; IRF1; IRF2; IRF5; IRF6; IRF8; IRX2; IRX3; ISL1; JAK2; JUNB; KCNIP3; KCTD1; KDM1B; KDM5A; KLF14; KLF17; KLF3; KLF6; KLF7; KLF8; KLF9; L3MBTL4; LHX1; LHX8; MAEL; MAF; MAFF; MAK; MAML3; MAPK8IP1; MBD1; MEOX1; MESP1; MITF; MKL1; MKX; MNT; MSX1; MSX2; MXD1; MYCL; MYNN; MYOCD; MYOD1; MYOG; MYT1; NAB2; NCOA7; NCOR1; NCOR2; NEUROG3; NFATC1; NFATC2; NFE2L2; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NPAS2; NR0B2; NR4A1; NR4A3; NR6A1; NRIP1; NRL; OLIG2; ONECUT3; OTX1; OVOL1; PAX4; PAX6; PAX7; PBRM1; PCBD2; PHF1; PHF12; PHOX2A; PIAS2; POU1F1; POU2F1; POU2F3; POU5F2; PPARD; PQBP1; PRDM15; PRDM2; PROX2; PRPF6; PRRX1; RARG; RAX2; RELA; RELB; REPIN1; RHOA; RNF141; RSF1; RUNX3; SATB2; SERTAD2; SHOX2; SIM1; SIRT2; SIX4; SIX5; SIX6; SKIL; SMAD3; SMARCA1; SMARCC1; SMYD1; SNAI2; SNAPC4; SOHLH2; SOX9; SP140L; SP3; SP7; SRF; SSX1; ST18; STAT5A; STAT6; SUFU; TADA1; TAF1L; TAF4B; TAF6L; TAL2; TBL1Y; TBX10; TBX6; TCEA2; TEAD3; TFAP2C; TFE3; THAP9; THRA; TLE4; TLX2; TLX3; TWIST2; UBE2B; UBTF; URI1; VDR; VSX1; WIZ; WT1; WWC1; YBX2; ZBED2; ZBED4; ZBTB24; ZBTB26; ZBTB37; ZBTB40; ZBTB47; ZBTB7C; ZEB2; ZFHX2; ZFP1; ZFP42; ZFP69B; ZIC4; ZKSCAN3; ZMYM2; ZNF107; ZNF160; ZNF19; ZNF221; ZNF254; ZNF257; ZNF264; ZNF286A; ZNF345; ZNF350; ZNF366; ZNF384; ZNF391; ZNF443; ZNF444; ZNF530; ZNF541; ZNF549; ZNF550; ZNF560; ZNF563; ZNF567; ZNF572; ZNF578; ZNF605; ZNF611; ZNF620; ZNF621; ZNF625; ZNF646; ZNF664; ZNF668; ZNF671; ZNF674; ZNF683; ZNF688; ZNF697; ZNF7; ZNF71; ZNF713; ZNF765; ZNF770; ZNF79; ZNF81; ZNF829; ZNF836; ZNF837; ZNF99; ZSCAN10; ZXDA; ZXDB
Down-regulation	343	ADRB2; AFF1; ALX1; ANHX; AR; ARID1B; ARID4A; ARX; ASCL5; ATF7; ATOH7; BACH1; BANP; BATF; BBX; BLZF1; BPTF; BRCA1; BRDT; BTF3; CBFA2T2; CBX7; CCAR1; CCNE1; CDX4; CEBPE; CHD7; CIC; CREBZF; CSDC2; DEAF1; DMBX1; E2F8; E4F1; EBF3; EGR2; EHMT1; ELF3; ELP2; EMX2; EP400; ERBB4; ERF; ESR1; ESR2; ETV1; ETV4; ETV5; ETV6; FHL2; FHL5; FOXA1; FOXB1; FOXC1; FOXJ1; FOXJ2; FOXK1; FOXO1; FOXO3; FOXP4; FOXS1; FUBP1; GATA2; GATA3; GATA5; GCM1; GFI1; GFI1B; GLIS3; GRHL1; GTF2IRD2; GZF1; HDAC11; HDAC7; HDAC9; HES1; HES6; HIC1; HIC2; HIPK1; HIPK3; HIVEP3; HLTF; HNF4G; HOXA1; HOXA10; HOXA11; HOXA3; HOXA5; HOXA6; HOXA7; HOXB5; HOXB7; HOXC8; HOXD4; HOXD8; ID1; ID2; IKZF4; IL16; ING1; INSR; IRF4; IRX1; KAT2B; KAT6A; KAT8; KDM5B; KLF15; KMT2A; KMT2B; LCORL; LHX2; LHX6; LHX9; LIN28B; LMCD1; LOXL2; LYL1; MAFB; MAFK; MDM4; MED27; MED4; MEF2C; MEF2D; MEIS1; MGA; MIXL1; MKL2; MLX; MLXIP; MTA3; MXD3; MYB; MYF6; MYRFL; MZF1; NANOG; NCOA6; NEUROD2; NEUROG1; NFATC3; NFIA; NFRKB; NPAS4; NR0B1; NR2F2; NR2F6; NR3C2; NRF1; OLIG1; OTP; PAX1; PAX3; PAX5; PAX9; PBX2; PBX4; PBXIP1; PCGF2; PCGF5; PCGF6; PEX14; PEX2; PHF8; PITX1; PLAGL1; PML; POU3F2; POU5F1B; PPARA; PSIP1; PSMC3IP; RARA; RARB; REL; RERE; RFX2; SAFB; SALL4; SATB1; SCAI; SMAD6; SMAD7; SMAD9; SMARCA4; SMARCB1; SNAI1; SOHLH1; SOX10; SOX18; SOX2; SOX3; SOX5; SOX6; SP2; SP8; SPDEF; SPIB; SSX3; STAT2; SUPT3H; SUZ12; TADA3; TAF10; TAF7L; TBX1; TBX15; TBX20; TBX21; TBX22; TBX3; TBX5; TCF12; TEF; TFAP2B; TFCP2L1; TFEC; TGIF1; TGS1; THAP10; THAP11; THAP2; TOX2; TP63; TP73; TRERF1; TRIM29; TRIM33; TRPS1; TSHZ1; TSHZ3; TTF2; TULP4; TWIST1; TXNIP; UBE3A; UTF1; WNT4; XRCC6; ZBED6; ZBTB20; ZBTB38; ZBTB45; ZBTB48; ZFP30; ZFP36L1; ZFP41; ZFP69; ZFP90; ZGLP1; ZHX1; ZIC2; ZKSCAN4; ZKSCAN5; ZMIZ1; ZMYND11; ZMYND8; ZNF10; ZNF135; ZNF141; ZNF148; ZNF169; ZNF17; ZNF174; ZNF182; ZNF205; ZNF208; ZNF225; ZNF236; ZNF239; ZNF248; ZNF250; ZNF251; ZNF268; ZNF276; ZNF283; ZNF287; ZNF30; ZNF300; ZNF347; ZNF354C; ZNF397; ZNF404; ZNF407; ZNF41; ZNF420; ZNF431; ZNF439; ZNF44; ZNF440; ZNF483; ZNF485; ZNF493; ZNF507; ZNF521; ZNF529; ZNF536; ZNF546; ZNF551; ZNF552; ZNF554; ZNF555; ZNF562; ZNF564; ZNF57; ZNF575; ZNF580; ZNF585A; ZNF589; ZNF599; ZNF600; ZNF614; ZNF616; ZNF626; ZNF630; ZNF653; ZNF672; ZNF678; ZNF681; ZNF687; ZNF696; ZNF710; ZNF717; ZNF721; ZNF74; ZNF740; ZNF763; ZNF780B; ZNF782; ZNF789; ZNF792; ZNF793; ZNF813; ZNF814; ZNF827; ZNF85; ZNF850; ZSCAN12; ZSCAN18; ZSCAN23; ZSCAN30