Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04520	Tnfa	GSE9055	Umbilical vein cells	Human	2.25h	10ng/ml	EID4880

Response Information :

Types	Number	Response transcription factors
Up-regulation	307	AFF4; AIRE; AJUBA; ALX4; ARID4B; ARID5A; ASCL1; ATF3; ATF5; ATOH1; BARX1; BATF2; BATF3; BAZ2A; BCL11B; BCL9L; BHLHE23; BHLHE41; BIRC2; CASZ1; CDK2; CDYL; CEBPA; CEBPD; CECR2; CENPF; CERS3; CHD7; CITED4; CREB3L2; CRTC1; CTBP2; CTCFL; DACH2; DLX1; DMRTA2; DMRTC2; DOT1L; DR1; E2F1; E2F5; EBF1; EBF2; EN1; ENO1; ESR1; ESRRB; ESRRG; ETS1; EYA1; EYA2; FIGLA; FOXD2; FOXD3; FOXE3; FOXF1; FOXG1; FOXH1; FOXK1; FOXL1; FOXN1; FOXR2; GABPB1; GATAD2A; GBX2; GCM2; GRIP1; GTF2A1L; HABP4; HBP1; HDX; HELZ2; HES4; HEY1; HEYL; HIPK2; HIVEP1; HIVEP2; HKR1; HMG20B; HMX2; HOXC12; HOXC8; HOXC9; HOXD10; HOXD13; HR; ID4; IKZF1; IKZF2; IKZF3; ING5; INSM1; IRF1; IRF5; IRX3; IRX5; ISL2; JUNB; KCTD1; KDM5A; KLF14; KLF3; KLF4; KLF6; KLF8; KLF9; L3MBTL1; L3MBTL4; LHX4; LIMD1; LIN28A; LIN28B; LZTS1; MAML3; MAPK8IP1; MBD1; MED30; MEOX1; MITF; MKL1; MKX; MNDA; MNT; MSC; MSX1; MXD1; MYCL; MYCN; MYF6; MYNN; MYOD1; MYOG; MYT1; NAB2; NCOA7; NCOR1; NCOR2; NFATC1; NFE2L2; NFIX; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFRKB; NFYC; NHLH1; NPAS2; NR4A3; NR6A1; NUP62; OLIG2; OLIG3; OTX1; OVOL1; PAX4; PCBD2; PDX1; PEG3; PIAS2; POU1F1; POU3F4; POU5F2; PPARD; PPARGC1A; PQBP1; PRDM1; PRDM16; PRDM2; PRDM9; PRMT2; PROX2; PRRX1; PRRX2; RAX; RAX2; RELA; RELB; RFX3; RHOA; RSF1; RUNX2; RXRG; SALL1; SALL3; SATB2; SCRT1; SERTAD2; SIRT2; SIX3; SIX6; SKIL; SMAD3; SMAD4; SMARCA1; SNAPC4; SOHLH2; SOX1; SOX13; SOX6; SOX7; SOX9; SP140L; SP7; SPI1; SPZ1; SRCAP; SSX1; ST18; STAT5A; STAT5B; STAT6; SUFU; TAF1C; TAF4B; TAF6L; TBX10; TBX3; TBX4; TBX6; TCEA1; TCEA2; TCF25; TEAD3; TFAP2C; TFAP2D; TFDP2; TFE3; THAP3; THRAP3; THRB; TLX2; TLX3; TP63; TRAK1; TWIST2; UBE2B; URI1; VDR; VENTX; VGLL2; VHL; YBX2; ZBED4; ZBTB24; ZBTB37; ZBTB38; ZBTB47; ZFHX2; ZFP1; ZFP41; ZFP42; ZFP69B; ZFY; ZMYM2; ZNF107; ZNF235; ZNF254; ZNF286A; ZNF296; ZNF3; ZNF334; ZNF335; ZNF384; ZNF396; ZNF416; ZNF442; ZNF443; ZNF492; ZNF536; ZNF543; ZNF551; ZNF563; ZNF584; ZNF585B; ZNF595; ZNF597; ZNF605; ZNF611; ZNF620; ZNF625; ZNF628; ZNF646; ZNF668; ZNF671; ZNF674; ZNF678; ZNF683; ZNF697; ZNF71; ZNF749; ZNF765; ZNF771; ZNF775; ZNF80; ZNF800; ZNF808; ZNF836; ZNF852; ZNF99; ZSCAN10; ZSCAN2; ZSCAN20; ZSCAN4; ZXDB; ZXDC
Down-regulation	336	ABRA; ADRB2; AFF3; ALX1; ALX3; ARID1B; ARID3B; ARID4A; ARX; ASCL5; ATF2; ATF7; BARX2; BBX; BCL11A; BCLAF1; BLZF1; BPTF; BRDT; BTF3; CAPN15; CBFA2T3; CBX2; CBX7; CBX8; CCNE1; CDC5L; CERS5; CNOT2; CTBP1; CUX2; DMBX1; DTX1; DYRK1B; E2F8; EBF3; EED; EGR2; EGR3; EHMT1; EHMT2; ELK4; ELP2; ERCC2; ERF; ESR2; ETV5; EYA3; FEV; FEZF2; FHL2; FHL5; FIZ1; FOS; FOXA3; FOXC1; FOXL2; FOXN2; FOXN3; FOXO3; FOXP2; FOXS1; GATA1; GATA2; GATA3; GATA5; GCM1; GFI1; GFI1B; GRHL1; GTF2A1; GTF2IRD2; HCFC1; HDAC9; HES1; HES6; HIC1; HIPK3; HLTF; HMGA2; HMGB2; HNF4G; HOXA10; HOXA11; HOXA2; HOXA5; HOXA7; HOXB6; HOXB9; HOXC10; HOXC6; HOXD4; HSF5; ID1; ID2; ING1; ING3; ISX; JARID2; JUND; KAT6A; KDM5D; KLF15; KLF16; KLF17; KMT2C; KMT2D; LCORL; LHX2; LHX3; LMCD1; LMO1; LYL1; MAK; MDM2; MED1; MED13; MED23; MED25; MED31; MEIS1; MGA; MIXL1; MLXIP; MSX2; MTA3; MYBL1; MYT1L; NCOA6; NEUROG3; NFIC; NFX1; NPM2; NR0B1; NR0B2; NR4A2; OVOL2; PAX1; PBXIP1; PCGF5; PHF8; PHIP; PIAS4; PITX1; PLAG1; PML; PMS1; POU3F2; POU3F3; POU6F1; PPARG; PRDM14; PRDM15; PROP1; PSIP1; RARA; RARB; RCOR3; RFX4; RNF6; RYBP; SAP30; SETDB2; SIM1; SIM2; SIX1; SMAD7; SMAD9; SMARCA2; SMARCC2; SOX11; SOX18; SOX3; SOX30; SOX5; SOX8; SP1; SP110; SPDEF; SPIC; SUPT3H; SUV39H2; TADA3; TAF11; TAF7L; TBL1XR1; TBX1; TBX15; TBX22; TBX5; TCF12; TCF15; TCF20; TCFL5; TEAD1; TEF; TERF2; TFAP2A; TFAP2B; TFAP4; TGS1; THAP10; THAP11; THAP2; THAP5; TLE1; TONSL; TP73; TRERF1; TSHZ1; TSHZ3; TTF2; TULP4; TXNIP; UBE2I; VAX2; YY1; ZBED6; ZBTB1; ZBTB12; ZBTB18; ZBTB44; ZBTB8B; ZFP2; ZFP3; ZFP30; ZFP36L1; ZFP37; ZFPM1; ZGLP1; ZIC2; ZKSCAN5; ZMYND11; ZMYND8; ZNF10; ZNF101; ZNF117; ZNF141; ZNF148; ZNF157; ZNF205; ZNF214; ZNF215; ZNF224; ZNF226; ZNF230; ZNF24; ZNF248; ZNF25; ZNF250; ZNF268; ZNF287; ZNF292; ZNF30; ZNF300; ZNF324B; ZNF333; ZNF33B; ZNF343; ZNF347; ZNF350; ZNF366; ZNF382; ZNF397; ZNF407; ZNF415; ZNF420; ZNF431; ZNF439; ZNF44; ZNF460; ZNF461; ZNF467; ZNF507; ZNF517; ZNF519; ZNF521; ZNF528; ZNF529; ZNF547; ZNF554; ZNF562; ZNF568; ZNF571; ZNF572; ZNF575; ZNF577; ZNF594; ZNF599; ZNF613; ZNF614; ZNF619; ZNF626; ZNF627; ZNF652; ZNF653; ZNF655; ZNF660; ZNF667; ZNF672; ZNF677; ZNF680; ZNF681; ZNF684; ZNF687; ZNF696; ZNF700; ZNF711; ZNF717; ZNF732; ZNF736; ZNF74; ZNF740; ZNF75D; ZNF763; ZNF77; ZNF770; ZNF777; ZNF780A; ZNF780B; ZNF786; ZNF787; ZNF792; ZNF793; ZNF81; ZNF813; ZNF814; ZNF844; ZNF850; ZNF891; ZNF92; ZSCAN12; ZSCAN16; ZSCAN18; ZSCAN23; ZSCAN32