Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04518	Tnfa	GSE9055	Umbilical vein cells	Human	1.75h	10ng/ml	EID4878

Response Information :

Types	Number	Response transcription factors
Up-regulation	265	AIRE; ALX4; ARID4B; ARNT; ATF3; ATF6B; ATN1; ATOH1; BARX1; BASP1; BATF2; BCL6; BCL9L; BHLHE41; BIRC2; BRD8; CARHSP1; CASZ1; CBX2; CBX6; CCNC; CDK2; CDK9; CDYL; CEBPD; CERS3; CHD2; CHD6; CHD7; CITED4; CREB3L2; CTCFL; DAXX; DLX2; DLX5; DMRT2; DMRT3; E2F2; E2F5; EGR4; EHF; EN2; ENO1; EPC1; ERBB2; ETS1; EYA1; EZH1; FERD3L; FOSB; FOSL1; FOXA2; FOXC2; FOXD1; FOXE1; FOXF1; FOXN1; FOXO4; GBX2; GCM2; GLI1; GMEB1; GRHL3; HABP4; HBP1; HDAC10; HDX; HELZ2; HES5; HEY1; HEY2; HEYL; HIPK2; HIVEP1; HIVEP2; HMGB4; HMX1; HMX2; HNF4A; HOXB8; HOXC9; HOXD10; HOXD9; HR; IL31RA; ING5; INSM1; IRF1; IRF5; IRF6; IRX2; IRX5; ISL1; JUNB; KAT6B; KCNIP3; KCTD1; KLF14; KLF3; KLF4; KLF6; KLF7; KLF8; KLF9; LEF1; LHX1; LIMD1; LITAF; LMO1; LMX1A; LMX1B; MAEL; MAF; MAFF; MAFG; MAFK; MAML3; MAPK8IP1; MBD1; MEOX1; MKX; MNDA; MSC; MSX1; MYBL1; MYCL; MYCN; MYF5; MYNN; MYOCD; MYOD1; MYRF; NAB1; NAB2; NCOA7; NEUROD4; NFATC1; NFE2L2; NFKB1; NFKB2; NFKBIA; NFKBIZ; NHLH2; NOC2L; NPAT; NR4A1; NR4A3; OLIG3; ONECUT1; ONECUT3; OSR2; OTX1; PAX6; PBRM1; PCBD2; PCGF1; POU2F2; POU3F1; POU4F1; POU5F2; PPARGC1A; PQBP1; PRDM1; PRDM10; PRDM2; PROX1; PROX2; RARA; RAX2; RBPMS; RELB; REPIN1; RFX4; RFXAP; SALL1; SATB2; SERTAD2; SIX4; SMAD3; SMAD4; SNAPC4; SOX13; SOX7; SP140L; SP8; SPZ1; SRCAP; SRY; SSX3; STAT5A; TAF4B; TAF6L; TAL2; TBR1; TBX10; TBX2; TCEA2; TEAD3; TEF; TFAP2C; TFE3; TGIF1; THRA; THRB; TLX2; TLX3; TSC22D1; UBE2B; URI1; VDR; VHL; WIZ; ZBED4; ZBTB24; ZBTB26; ZBTB37; ZBTB38; ZBTB42; ZBTB47; ZEB2; ZFP1; ZFP36L2; ZFP69B; ZFY; ZIC1; ZIM3; ZMIZ2; ZMYM2; ZNF160; ZNF165; ZNF17; ZNF180; ZNF235; ZNF254; ZNF286A; ZNF334; ZNF341; ZNF345; ZNF384; ZNF396; ZNF416; ZNF444; ZNF541; ZNF543; ZNF550; ZNF556; ZNF563; ZNF578; ZNF584; ZNF585B; ZNF605; ZNF611; ZNF620; ZNF621; ZNF625; ZNF683; ZNF71; ZNF749; ZNF852; ZNF90; ZNF99; ZSCAN2; ZSCAN20; ZXDA; ZXDB
Down-regulation	290	AFF2; AFF4; ALX1; ALX3; ARID2; ARID3B; ARID4A; ASCL3; ASCL5; ATF7; ATOH7; BANP; BARX2; BATF; BBX; BCL11A; BCL6B; BCLAF1; BLZF1; BRD3; BTF3; CARF; CCAR1; CDX4; CHD9; CITED2; CNOT3; CREBZF; CSDC2; CUX2; DCC; DLX4; DYRK1B; EBF1; ELF3; ELP2; EN1; EP400; ERF; ESR1; ESR2; ETS2; FEZF2; FOXB1; FOXC1; FOXK1; FOXK2; FOXL2; FOXN4; FOXO1; FOXP3; FOXP4; FOXS1; FUBP1; GATA2; GATA5; GCM1; GSX1; GTF2A1; GTF2A1L; GTF2A2; GTF3A; HDAC7; HDAC9; HES1; HES6; HIC1; HIPK1; HIRA; HIVEP3; HLF; HMGA2; HOXA10; HOXA11; HOXA2; HOXA5; HOXB5; HOXD4; ID1; ID2; IKZF4; IL16; ING1; IRX1; KAT6A; KLF15; KLF16; KMT2A; KMT2B; KMT2C; L3MBTL1; LCORL; LHX2; LHX9; LIN28A; LYL1; MECOM; MECP2; MED25; MED27; MED6; MEIS3; MGA; MIXL1; MKL2; MLX; MLXIP; MLXIPL; MXD3; MYSM1; NANOG; NCOR2; NEUROG1; NFATC2; NFIB; NOBOX; NPAS4; NR0B1; NR5A1; ORC2; PAX3; PAX5; PAX8; PAX9; PAXBP1; PBX2; PCGF3; PITX1; PLAG1; PML; PMS1; POU3F2; POU5F1B; PPARG; PPARGC1B; PSIP1; RBBP4; RCOR2; RNF6; RXRB; SAFB2; SALL2; SALL4; SAP30; SCAI; SLC2A4RG; SMAD7; SMAD9; SNAI1; SOX11; SOX14; SOX18; SOX2; SOX21; SOX3; SOX5; SP5; SPIB; SPIC; STAT2; SUZ12; TADA3; TAF11; TBL1XR1; TBX15; TBX21; TBX22; TBX3; TBX5; TCERG1; TCF15; TERF2; TFAP2B; TFAP2E; TFEB; TGFB1; THAP10; THAP2; TOX3; TRIM11; TRIM33; TSC22D4; TSHZ1; TSHZ2; TSHZ3; TUB; TULP4; TXNIP; WNT4; ZBED6; ZBTB2; ZBTB20; ZBTB44; ZFHX4; ZFP2; ZFP3; ZFP36L1; ZFP90; ZFPM1; ZHX3; ZIC2; ZIC3; ZKSCAN1; ZKSCAN5; ZNF101; ZNF117; ZNF124; ZNF14; ZNF148; ZNF154; ZNF157; ZNF16; ZNF182; ZNF197; ZNF205; ZNF215; ZNF224; ZNF225; ZNF226; ZNF233; ZNF234; ZNF236; ZNF248; ZNF25; ZNF251; ZNF268; ZNF30; ZNF324B; ZNF337; ZNF347; ZNF398; ZNF41; ZNF439; ZNF440; ZNF441; ZNF446; ZNF493; ZNF496; ZNF500; ZNF507; ZNF519; ZNF529; ZNF536; ZNF544; ZNF555; ZNF562; ZNF564; ZNF57; ZNF571; ZNF577; ZNF589; ZNF594; ZNF607; ZNF613; ZNF623; ZNF626; ZNF653; ZNF660; ZNF674; ZNF680; ZNF684; ZNF696; ZNF70; ZNF700; ZNF705G; ZNF710; ZNF717; ZNF736; ZNF74; ZNF75D; ZNF76; ZNF777; ZNF781; ZNF785; ZNF792; ZNF80; ZNF81; ZNF814; ZNF827; ZNF831; ZNF84; ZNF844; ZNF85; ZNF850; ZNF891; ZNF92; ZSCAN1; ZSCAN12; ZSCAN23; ZSCAN30