Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04515	Tnfa	GSE9055	Umbilical vein cells	Human	1h	10ng/ml	EID4875

Response Information :

Types	Number	Response transcription factors
Up-regulation	277	AIRE; ALX4; ANKRD30A; ARID4B; ASCL1; ATF3; ATF5; ATF6B; ATOH1; BARX1; BASP1; BCL6; BCL9L; BCOR; BHLHE22; BHLHE40; BHLHE41; BRD4; BRD8; BRDT; CCNC; CD3D; CEBPD; CENPF; CERS3; CERS4; CHD2; CHD6; CHD7; CITED1; CITED4; CREB3L2; CTCFL; DLX3; DMRTA1; DOT1L; E2F5; EBF2; EGR1; EGR3; EGR4; ELK1; EN2; ENO1; EPC1; ERBB2; ESRRG; ETS1; ETV7; FEV; FIGLA; FOSB; FOSL1; FOSL2; FOXA2; FOXA3; FOXC2; FOXF1; FOXG1; FOXH1; FOXN1; FOXO4; FOXR2; GATAD2A; GBX2; GLI1; GLI2; GLIS1; GRHL3; GRIP1; GTF2A1L; HABP4; HBP1; HELZ2; HES7; HEY1; HEY2; HEYL; HIPK2; HIVEP2; HKR1; HLX; HMG20B; HMGB4; HMX2; HNF4A; HNRNPD; HOXC10; HOXC12; HOXC9; ID4; IL31RA; ING5; INSM1; INSM2; IRF1; IRF8; IRX2; IRX3; IRX5; JAK2; JUNB; KDM5A; KLF10; KLF14; KLF4; KLF6; KLF7; KLF9; KMT2E; L3MBTL4; LHX1; LHX8; LHX9; LIMD1; MAF; MAFF; MAFK; MAML3; MAPK8IP1; MBD1; MED24; MED30; MITF; MNDA; MNT; MSX1; MTA2; MYCL; MYCN; MYF5; MYRF; MYT1; NAB2; NCOA7; NCOR1; NFATC1; NFKB1; NFKB2; NFKBIA; NFKBIZ; NPAS1; NPAS2; NR4A1; NR4A2; NR4A3; NR5A2; NR6A1; OLIG2; ONECUT1; ONECUT3; OSR2; OTX1; PBRM1; PCBD2; PCGF1; PDX1; PHF1; PHOX2B; PITX2; POU1F1; POU4F1; PPARD; PRDM10; PRDM7; PRDM9; PRKDC; RAX2; RCOR2; REL; RELB; REPIN1; RHOA; RORA; RREB1; RSF1; RUNX3; RXRG; SALL1; SF1; SIM2; SIRT2; SIX4; SMAD4; SMARCA1; SOX1; SOX13; SOX7; SOX9; SP140L; SPIC; SRCAP; STAT5B; SUFU; TADA1; TAF1C; TAF1L; TAF4B; TBL1Y; TCF21; TEAD3; TFAP2C; TFDP2; TFE3; THAP3; THRA; THRB; TLX2; TSC22D1; UBTF; URI1; VDR; VHL; VSX1; WIZ; YBX2; ZBED4; ZBTB21; ZBTB24; ZBTB42; ZBTB47; ZBTB7B; ZFHX2; ZFP1; ZFP36L2; ZFP42; ZFP69B; ZFY; ZIC1; ZIC5; ZKSCAN3; ZMIZ2; ZMYM2; ZNF160; ZNF165; ZNF254; ZNF3; ZNF334; ZNF335; ZNF341; ZNF345; ZNF366; ZNF407; ZNF425; ZNF443; ZNF444; ZNF446; ZNF471; ZNF524; ZNF543; ZNF557; ZNF563; ZNF567; ZNF578; ZNF583; ZNF597; ZNF605; ZNF625; ZNF646; ZNF664; ZNF682; ZNF683; ZNF688; ZNF71; ZNF713; ZNF749; ZNF771; ZNF775; ZNF800; ZNF808; ZNF852; ZNF90; ZNF99; ZSCAN20; ZSCAN4; ZXDB; ZXDC
Down-regulation	259	ABRA; ACTL6B; AFF1; ALX3; ANHX; ARID1B; ARID4A; ARID5B; ARX; ASCL3; ASCL5; ATF2; BARHL1; BARX2; BATF; BBX; BLZF1; BRCA1; BRD7; CAPN15; CARF; CBX8; CCAR1; CDX4; CRYM; CSDC2; CTBP1; CUX2; DACH2; DMBX1; DYRK1B; EED; EHMT2; ELF3; ELF5; EMX2; EP400; ESR2; ETV4; FEZF2; FHL5; FOS; FOXB1; FOXC1; FOXK1; FOXN3; FOXN4; FOXO1; FOXP2; FOXP3; FOXP4; FUBP1; GATA1; GATA3; GATA5; GFI1B; GSX1; GTF2IRD2; HCFC1; HDAC6; HDAC7; HES5; HES6; HIC1; HIF3A; HIPK1; HIRA; HIVEP3; HLF; HOXA10; HOXA11; HOXA5; HOXD10; HOXD11; ID1; ID3; IKZF4; IL16; ING1; IRF4; IRX1; ISX; JDP2; KAT6B; KDM4A; KLF16; KLF2; KMT2A; KMT2C; KMT2D; LHX2; MECP2; MED27; MED31; MEIS3; MIXL1; MLXIP; MLXIPL; MYB; NANOG; NCOR2; NFAT5; NFATC3; NFIC; NHLH1; NR1I3; NR3C1; OTP; OTX2; OVOL2; PAX1; PAX5; PAX8; PAX9; PBX2; PHF8; PITX1; PLAG1; PML; PMS1; POU3F3; POU5F1B; PPARG; PPARGC1B; PRDM14; PRDM15; PRDM16; PROP1; PRRX1; RBPJL; RFX4; RORB; RXRA; SAFB2; SALL4; SATB1; SETDB1; SETDB2; SIN3A; SIX2; SKIL; SMAD7; SMAD9; SMARCA2; SNAI3; SOX14; SOX2; SP2; SP4; STAT2; SUZ12; TADA3; TAF11; TBL1XR1; TBR1; TBX20; TBX21; TBX3; TCF12; TEF; TFAP2B; THAP2; TONSL; TOX3; TP63; TSC22D3; TSC22D4; TSHZ2; TUB; TULP2; TULP4; TWIST1; TXNIP; WNT4; YY1; ZBTB44; ZBTB48; ZBTB7A; ZFP2; ZFP3; ZFP36L1; ZFP64; ZFP69; ZFP90; ZKSCAN5; ZMYND11; ZNF101; ZNF112; ZNF114; ZNF208; ZNF215; ZNF222; ZNF233; ZNF234; ZNF268; ZNF283; ZNF287; ZNF320; ZNF354C; ZNF382; ZNF398; ZNF408; ZNF420; ZNF439; ZNF44; ZNF441; ZNF460; ZNF461; ZNF473; ZNF493; ZNF507; ZNF544; ZNF554; ZNF555; ZNF562; ZNF564; ZNF571; ZNF573; ZNF585A; ZNF589; ZNF594; ZNF595; ZNF599; ZNF600; ZNF613; ZNF614; ZNF616; ZNF624; ZNF627; ZNF630; ZNF641; ZNF653; ZNF655; ZNF671; ZNF672; ZNF680; ZNF684; ZNF696; ZNF70; ZNF705G; ZNF710; ZNF732; ZNF74; ZNF77; ZNF776; ZNF777; ZNF780A; ZNF786; ZNF792; ZNF793; ZNF8; ZNF835; ZNF837; ZNF844; ZNF865; ZNF92; ZNF93; ZSCAN23; ZSCAN32