Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04514	Tnfa	GSE9055	Umbilical vein cells	Human	0.75h	10ng/ml	EID4874

Response Information :

Types	Number	Response transcription factors
Up-regulation	310	ALX4; ARID1A; ARID1B; ARID3A; ARID5A; ARID5B; ASCL1; ATF3; ATN1; ATOH1; BARX1; BASP1; BATF2; BCL6; BCOR; BHLHE40; BHLHE41; CALR; CASZ1; CDX1; CEBPD; CERS3; CHD2; CHD6; CIITA; CITED1; CITED4; CNOT2; CREB3L1; CREB3L3; CREB5; CTCFL; DLX6; DMBX1; DMRT1; DR1; E2F1; E2F2; EBF2; EGR1; EGR2; EGR3; EGR4; EHF; ELK1; EN2; ENO1; EPC1; ERBB2; ESRRB; ESRRG; ESX1; ETS1; ETV6; ETV7; EYA1; FERD3L; FIZ1; FOS; FOSB; FOSL1; FOSL2; FOXA2; FOXC2; FOXD1; FOXE1; FOXF1; FOXG1; FOXL1; FOXN1; FOXN2; GABPA; GATA4; GBX2; GCM2; GFI1; GLI2; HABP4; HDAC10; HES5; HES7; HEY1; HEY2; HEYL; HMG20B; HMGB4; HMX1; HMX2; HNF1B; HNF4A; HNRNPD; HOXC12; HOXC5; HOXC9; HOXD1; HOXD13; HR; HSF1; ID4; IL31RA; INSM1; INSM2; IRF1; IRF5; IRF6; IRX2; IRX3; IRX5; ISX; JAK2; JUNB; KCNIP3; KCTD1; KDM5A; KDM5D; KLF10; KLF13; KLF14; KLF4; KLF6; KLF7; KLF9; KMT2A; LEF1; LMO1; LMX1B; MAF; MAFF; MAZ; MBD1; MBD2; MED24; MGA; MITF; MKL1; MKX; MNDA; MNT; MNX1; MSX1; MYBL1; MYC; MYCL; MYF5; MYNN; MYRF; MYT1; NAB1; NAB2; NEUROD4; NFATC4; NFKB2; NFKBIA; NFKBIZ; NFYA; NHLH2; NPAT; NR4A1; NR4A2; NR4A3; NRL; ONECUT1; ONECUT2; ONECUT3; OSR1; OSR2; PATZ1; PAX4; PCBD2; PDX1; PHF1; PHF2; PIAS2; PITX2; POLR2A; POU2F3; POU3F1; POU4F1; POU5F2; PRDM1; PRDM15; PROX2; RARG; RAX2; RB1; RBL1; RBPMS; REPIN1; RFX3; RFXAP; RHOA; RORC; RREB1; RSF1; SALL3; SATB2; SF1; SIRT2; SIX3; SIX4; SKIL; SMAD4; SMARCD1; SNAPC4; SOX1; SOX10; SOX7; SP3; SP5; SPZ1; SRCAP; SSX3; STAT2; SUFU; SUPT6H; TADA1; TAF1C; TAL2; TBX10; TBX2; TBX4; TCF21; TEAD3; TFAP2A; TFE3; THAP9; TLX2; TLX3; TP53; TRIB3; TRIM25; TSHZ2; URI1; USP22; VDR; VGLL2; VHL; VSX1; WIZ; WT1; YBX2; ZBED2; ZBED4; ZBTB26; ZBTB37; ZBTB40; ZBTB45; ZBTB47; ZFP1; ZFP36L2; ZFP42; ZFP69B; ZFY; ZIC1; ZIC4; ZIC5; ZKSCAN3; ZMIZ2; ZMYM2; ZNF107; ZNF157; ZNF160; ZNF165; ZNF221; ZNF257; ZNF286A; ZNF3; ZNF334; ZNF335; ZNF345; ZNF362; ZNF384; ZNF391; ZNF396; ZNF443; ZNF444; ZNF446; ZNF471; ZNF524; ZNF527; ZNF543; ZNF547; ZNF548; ZNF549; ZNF557; ZNF578; ZNF584; ZNF597; ZNF605; ZNF611; ZNF625; ZNF641; ZNF664; ZNF668; ZNF671; ZNF683; ZNF688; ZNF697; ZNF749; ZNF775; ZNF777; ZNF780A; ZNF800; ZNF808; ZNF852; ZNF853; ZNF90; ZSCAN20; ZXDA; ZXDB
Down-regulation	251	AFF3; AFF4; ARHGAP35; ARX; ASCL5; BARHL1; BARX2; BATF; BBX; BCL11A; BDP1; BLZF1; BRD3; BRD7; BRF2; BTF3; CCAR1; CEBPE; CHD7; CSDC2; CTBP2; DACH2; DCC; DEAF1; DMRT3; DTX1; EBF1; EED; ELF5; ELP2; EP400; ERF; ESR1; ESR2; ETV5; EYA3; FOXA1; FOXA3; FOXB1; FOXC1; FOXN3; FOXN4; FOXP1; GATA5; GCM1; GFI1B; GSX1; GTF2A1; GTF2IRD2; GTF3A; HES6; HIC2; HIPK3; HIRA; HLF; HMGA2; HOXA1; HOXA5; HOXB7; HSF5; ID1; IKZF1; IL16; ING1; ING2; JDP2; KAT6A; KDM5B; KLF2; KMT2B; KMT2C; LHX2; LIN28B; MAFK; MED14; MED27; MED31; MEF2D; MEOX1; MIER3; MIXL1; MKL2; MLX; MLXIP; MLXIPL; MXD3; MYBBP1A; MYT1L; NANOG; NCOA6; NEUROD1; NEUROG1; NFRKB; NFX1; NOBOX; NPAS4; NR0B1; NR1H4; NR3C1; OVOL2; PAX2; PAX5; PAX8; PCGF5; PEX2; PITX1; PML; PMS1; POU4F2; PRDM16; PRRX1; PSMC3IP; PURA; RARB; RBBP4; RBPJ; RBPJL; RCOR3; REST; RNF6; RORB; RUNX2; SALL4; SAP30; SATB1; SETDB2; SIX1; SIX2; SMARCA2; SMARCA4; SMARCC2; SOX11; SOX14; SOX2; SOX21; SOX8; SP100; SP2; SPIB; STAT5B; SUZ12; TADA3; TAF11; TBR1; TBX22; TBX3; TCF15; TCF7L2; TFAP2B; TFEB; TGS1; THAP2; TONSL; TOX3; TP73; TRIM11; TRIM33; TRPS1; TSC22D4; TTF2; TULP2; TXNIP; WNT4; XRCC6; ZBED6; ZBTB12; ZBTB20; ZBTB44; ZBTB48; ZFP2; ZFP3; ZFP41; ZKSCAN4; ZKSCAN5; ZNF101; ZNF112; ZNF14; ZNF154; ZNF169; ZNF175; ZNF184; ZNF197; ZNF215; ZNF224; ZNF233; ZNF256; ZNF26; ZNF268; ZNF283; ZNF287; ZNF324; ZNF324B; ZNF382; ZNF416; ZNF431; ZNF439; ZNF44; ZNF441; ZNF460; ZNF461; ZNF467; ZNF485; ZNF500; ZNF502; ZNF507; ZNF519; ZNF536; ZNF544; ZNF554; ZNF555; ZNF562; ZNF564; ZNF57; ZNF571; ZNF572; ZNF599; ZNF607; ZNF610; ZNF613; ZNF624; ZNF626; ZNF639; ZNF653; ZNF654; ZNF655; ZNF660; ZNF672; ZNF677; ZNF682; ZNF684; ZNF687; ZNF7; ZNF709; ZNF710; ZNF717; ZNF721; ZNF732; ZNF74; ZNF770; ZNF782; ZNF792; ZNF8; ZNF80; ZNF814; ZNF827; ZNF844; ZNF850; ZNF891; ZSCAN1; ZSCAN12; ZSCAN23