Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04513	Tnfa	GSE9055	Umbilical vein cells	Human	0.5h	10ng/ml	EID4873

Response Information :

Types	Number	Response transcription factors
Up-regulation	271	AJUBA; ALX4; ASCL1; ATF3; ATF5; ATOH1; BARX1; BASP1; BATF2; BCL6; BHLHE22; BHLHE40; BRDT; CALR; CASZ1; CBX2; CBX6; CD3D; CDX2; CEBPD; CENPF; CERS3; CERS4; CHD2; CIITA; CITED1; CITED4; CNOT2; CREB3L1; CREB3L3; CREB5; CRX; DCC; DLX1; DLX6; DMRTA1; DNAJC2; DOT1L; DR1; EGR1; EGR2; EGR3; EGR4; EHF; EN2; EPC1; ESRRA; ESRRG; EYA1; FERD3L; FHL5; FOS; FOSB; FOSL1; FOXA2; FOXC2; FOXD1; FOXE1; FOXF1; FOXH1; FOXN1; FOXO4; GATA4; GCM2; GLIS1; GRHL3; GRIP1; GSC2; HES1; HES6; HEY1; HEY2; HEYL; HLX; HMX2; HNF4A; HOXC12; HOXC13; HOXC5; HOXC9; HOXD10; HOXD13; IKZF3; ING5; INSM1; INSM2; IRF1; IRX5; JAK2; JUN; JUNB; KCTD1; KLF1; KLF10; KLF14; KLF9; LEF1; LHX1; LMX1A; MAEL; MAFF; MAFG; MAML3; MAPK8IP1; MBD1; MED26; MED30; MIER1; MITF; MKL1; MNDA; MNT; MSX1; MYC; MYCL; MYF5; MYF6; MYOCD; MYRF; MYT1; NAB1; NCOR2; NEUROD1; NFE2; NFIX; NFKBIA; NFKBIZ; NR1I2; NR2F6; NR4A1; NR4A2; NR6A1; NRL; ONECUT3; OSR2; OTX1; OVOL1; PATZ1; PAX4; PBRM1; PCBD2; PCGF1; PHF1; PHF2; PIAS2; PITX2; POLR2A; POU3F1; POU4F1; POU4F3; POU5F2; PRDM10; PRDM12; PRDM15; PRDM6; PRMT2; PROX1; PYGO2; RARG; RAX2; RBL1; RFX3; RFX4; RFX6; RHOA; RNF141; SALL1; SALL3; SATB2; SCRT1; SIRT7; SIX4; SMAD4; SMARCD1; SNAPC4; SOHLH2; SOX1; SOX9; SP140L; SPZ1; SRF; SSX3; SUFU; TADA1; TAF1C; TAF6L; TBL1Y; TCEA2; TCF21; TCF7; TEAD3; TFDP2; THAP3; THRB; TLX1; TLX2; TLX3; TONSL; TRIM28; TSC22D1; UBE2B; UBTF; URI1; USP22; VDR; VHL; VSX1; WIZ; ZBED4; ZBTB32; ZBTB37; ZBTB40; ZBTB42; ZBTB47; ZBTB7B; ZBTB7C; ZFP42; ZIC1; ZIC5; ZIM3; ZMIZ2; ZMYM2; ZNF160; ZNF165; ZNF19; ZNF235; ZNF254; ZNF292; ZNF3; ZNF335; ZNF345; ZNF358; ZNF384; ZNF429; ZNF44; ZNF443; ZNF444; ZNF471; ZNF483; ZNF524; ZNF526; ZNF530; ZNF540; ZNF541; ZNF543; ZNF547; ZNF549; ZNF563; ZNF567; ZNF572; ZNF578; ZNF583; ZNF625; ZNF628; ZNF646; ZNF671; ZNF682; ZNF683; ZNF688; ZNF749; ZNF763; ZNF765; ZNF771; ZNF79; ZNF852; ZNF853; ZNF865; ZNF90; ZNF99; ZSCAN20; ZXDB
Down-regulation	257	ABRA; ACTL6B; AFF3; ALX3; ANHX; ARID1B; ARID3B; ARX; ASCL3; ASCL5; ASH1L; ATF2; ATF7; ATF7IP; ATOH7; BARX2; BATF; BCL6B; BRCA1; BRIP1; BTF3; CARF; CBFA2T2; CCAR1; CCNE1; CEBPE; CERS5; CHD9; CREB3L2; CREBZF; CSDC2; DACH2; DMBX1; EBF1; EHMT1; ELF5; EN1; ERBB4; ERF; ESR1; ESR2; EWSR1; EYA3; FEZF2; FIZ1; FLI1; FOXA1; FOXA3; FOXI1; FOXJ1; FOXL1; FOXO3; FOXP1; FOXP2; FOXP4; FUBP1; GATA5; GCM1; GTF2A1; GTF2A2; GTF2I; GTF2IRD2; GTF3A; HCFC1; HDAC11; HDAC2; HDAC6; HDAC7; HIF3A; HIPK1; HIPK3; HIRA; HMGA2; HNF4G; HNRNPD; HSF5; ID1; IKZF1; IKZF4; IL16; ING1; KAT6A; KDM5B; KLF12; KLF17; KLF5; KMT2B; KMT2D; LHX2; MAK; MAX; MBD4; MDM4; MECOM; MED1; MED23; MED24; MED25; MGA; MIXL1; MLX; MLXIP; MSC; MYSM1; NANOG; NCOA2; NCOA3; NCOA6; NEUROG3; NFAT5; NFKBIB; NPAS4; NR0B1; NR1D2; NR5A1; NR5A2; OLIG1; ONECUT1; OVOL2; PAX3; PAX5; PAX8; PAXBP1; PBX2; PEX2; PGR; PHF8; PITX1; PKNOX1; PML; PMS1; POU4F2; PPARG; PRDM16; PRDM5; PRPF6; PRRX1; PSIP1; RAX; RB1; RBBP4; RBL2; RBPJL; RNF6; RORB; RUNX2; SAFB2; SALL4; SCAI; SETD2; SETDB2; SIM1; SIX1; SMAD2; SMAD3; SMAD7; SMAD9; SMARCA4; SMARCC2; SNAI3; SOX10; SOX11; SOX14; SOX15; SOX2; SP110; SP8; SPIB; STAT1; STAT2; STAT3; SUZ12; TAF11; TBX22; TCERG1; TERF2; TFAP2B; TFAP2C; TFAP2E; TFCP2L1; TGS1; THRAP3; TLE4; TOX3; TP73; TRIP11; TSHZ2; TUB; TULP4; UBE3A; USF1; USP16; WNT4; YBX3; ZBED6; ZBTB12; ZBTB18; ZBTB20; ZBTB44; ZBTB45; ZBTB7A; ZFP2; ZFP90; ZFX; ZGLP1; ZIC2; ZKSCAN7; ZKSCAN8; ZNF101; ZNF135; ZNF169; ZNF197; ZNF224; ZNF226; ZNF229; ZNF230; ZNF233; ZNF239; ZNF268; ZNF304; ZNF317; ZNF324B; ZNF347; ZNF354C; ZNF397; ZNF439; ZNF441; ZNF461; ZNF467; ZNF485; ZNF493; ZNF544; ZNF554; ZNF555; ZNF568; ZNF573; ZNF586; ZNF589; ZNF614; ZNF626; ZNF652; ZNF672; ZNF678; ZNF684; ZNF687; ZNF696; ZNF710; ZNF711; ZNF732; ZNF74; ZNF777; ZNF780B; ZNF785; ZNF80; ZNF814; ZNF92; ZSCAN1