Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04512	Tnfa	GSE9055	Umbilical vein cells	Human	0.25h	10ng/ml	EID4872

Response Information :

Types	Number	Response transcription factors
Up-regulation	249	AIRE; AJUBA; ALX4; ANHX; ARID3A; ARNT; ASCL1; ATF5; ATF6B; ATN1; ATOH1; BARX1; BAZ1B; BCL11B; BDP1; CARHSP1; CASZ1; CDK2; CDK9; CDX2; CERS3; CERS4; CHD6; CIITA; CITED2; CREB3L2; CRX; CRYM; CTCFL; DCC; DEAF1; DLX2; DLX5; DMRT2; DMRTA2; DOT1L; DR1; EBF2; EGR1; EHF; ELK1; ENO1; EPC1; ESRRG; ETV6; FOS; FOXA3; FOXD2; FOXD3; FOXH1; FOXN1; GBX2; GLI2; GLI4; GTF2A1; HABP4; HBP1; HELZ2; HEY1; HEY2; HEYL; HIPK2; HIVEP2; HMG20B; HMGB2; HMX2; HNF4A; HNRNPD; HOXB1; HOXB8; HOXC10; HOXC5; HOXC8; HOXD1; HR; ID4; INSM1; IRF1; IRF5; IRX2; IRX5; ISL1; JUNB; KCTD1; KDM5A; KLF14; KLF9; LHX1; LHX4; LIMD1; LIN28A; LMO1; LMX1A; LZTS1; MAEL; MAPK8IP1; MBD2; MDM2; MED26; MEOX2; MITF; MKL1; MNDA; MNT; MNX1; MSC; MSX2; MYB; MYCL; MYF6; MYOCD; NAB1; NCOR1; NEUROG2; NFE2; NFIX; NFKBIA; NFKBIZ; NFYA; NHLH2; NR6A1; ONECUT2; ONECUT3; OSR2; PAX4; PBRM1; PCBD2; PGR; POU1F1; POU2F2; POU2F3; POU4F1; PPARA; PPARGC1A; PRDM14; PRDM2; PROX1; PROX2; RAX2; RBL1; RBPMS; RFX6; RHOA; RNF141; RREB1; RUNX2; RUNX3; RYBP; SCRT1; SHOX2; SIN3A; SIX3; SIX6; SKIL; SMAD4; SMYD1; SP5; SRCAP; SREBF1; SRY; SSX3; ST18; SUFU; TAF1L; TBX2; TCERG1; TEAD3; TFAP2A; TFAP2D; TFDP2; TFEB; TGIF1; THAP9; THRA; THRAP3; THRB; TLX2; TLX3; TSC22D1; URI1; VHL; WIZ; YBX2; ZBED2; ZBED4; ZBTB12; ZBTB37; ZBTB40; ZBTB47; ZFP1; ZFP37; ZIC4; ZIC5; ZIM3; ZKSCAN3; ZMIZ2; ZMYM2; ZNF107; ZNF160; ZNF214; ZNF257; ZNF286A; ZNF292; ZNF3; ZNF334; ZNF335; ZNF345; ZNF350; ZNF362; ZNF384; ZNF396; ZNF407; ZNF425; ZNF446; ZNF501; ZNF524; ZNF527; ZNF540; ZNF541; ZNF543; ZNF550; ZNF563; ZNF572; ZNF578; ZNF584; ZNF585B; ZNF611; ZNF616; ZNF620; ZNF621; ZNF625; ZNF660; ZNF664; ZNF671; ZNF674; ZNF683; ZNF71; ZNF713; ZNF749; ZNF763; ZNF775; ZNF800; ZNF808; ZNF852; ZNF891; ZNF91; ZSCAN20; ZXDB; ZXDC
Down-regulation	237	ABRA; ACTL6B; AFF4; ALX3; ARID1B; ARNTL2; ARX; ASCL5; ATOH7; ATOH8; BARX2; BATF; BCL11A; BRCA1; BRDT; BTF3; CBL; CBX8; CDC5L; CHD7; CNOT3; CREBZF; CSDC2; CTBP1; DMBX1; DMRT3; DTX1; DYRK1B; EBF1; EHMT1; ELF5; ELK4; ESR1; ESR2; ETV4; EWSR1; FEZF2; FHL5; FOSL2; FOXA1; FOXF1; FOXL2; FOXN3; FOXO3; FOXP1; FOXP2; FOXS1; FUBP1; GATA5; GCM1; GLIS1; GSX1; GSX2; HAND1; HDAC11; HDAC7; HIC1; HIRA; HLF; HNF1A; HOXD11; HOXD13; IKZF4; IL16; ING1; IRF4; IRX1; IRX3; ISX; JARID2; KAT6B; KMT2A; KMT2B; KMT2D; LHX2; LIN28B; LOXL2; MAFK; MDM4; MED31; MEF2D; MEIS3; MGA; MIER3; MKL2; MLLT6; MLX; MLXIP; MTA3; MXD3; MYEF2; MYT1L; NANOG; NCOA6; NCOR2; NFATC1; NFKB2; NPAS2; NR1I3; NR5A1; NRL; PATZ1; PAX2; PAX3; PAXBP1; PCGF5; PEX2; PHF20; PHIP; PIAS4; PITX2; PML; POU3F3; PRRX1; RARA; RCOR3; RERE; RFX2; RFX4; RHOXF1; RNF6; RORA; RORB; RXRG; SAP30; SETDB2; SIM2; SLC2A4RG; SMAD3; SMARCA4; SMARCB1; SOX11; SOX14; SOX2; SOX21; SOX30; SOX5; SP1; SP2; SP4; SP6; SPDEF; SPIB; SPIC; SRF; STAT2; SUPT6H; SUZ12; TAF10; TAF11; TBL1XR1; TBX18; TBX22; TBX5; TCEA1; TCF15; TCF3; TEF; TFAP2B; TFEC; TGS1; THAP6; TLE1; TLE4; TONSL; TP73; TSC22D3; TSHZ2; TTF2; TULP4; TWIST1; WNT4; WWC1; YY1; ZBTB17; ZBTB18; ZBTB44; ZBTB45; ZFP14; ZFP2; ZFP28; ZFP36L1; ZFP64; ZFP90; ZFPM1; ZIC3; ZKSCAN1; ZNF114; ZNF132; ZNF154; ZNF174; ZNF205; ZNF208; ZNF225; ZNF229; ZNF24; ZNF268; ZNF304; ZNF324; ZNF324B; ZNF343; ZNF347; ZNF354C; ZNF415; ZNF417; ZNF429; ZNF439; ZNF444; ZNF485; ZNF496; ZNF517; ZNF536; ZNF547; ZNF554; ZNF562; ZNF568; ZNF579; ZNF580; ZNF589; ZNF595; ZNF597; ZNF599; ZNF627; ZNF668; ZNF672; ZNF678; ZNF687; ZNF711; ZNF717; ZNF732; ZNF777; ZNF782; ZNF80; ZNF81; ZNF837; ZNF92; ZSCAN1