Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID04198 Trichostatin-a GSE15069 Monolayer chondrocytes Mouse 24h 100M EID4558
Types Number Response transcription factors
Up-regulation 190 FOXG1; MYOCD; TFAP2C; VAX2; DMRTA2; GATA3; SSBP2; IRF6; ONECUT2; NFE2L3; MAPK8IP1; TXNIP; ZMIZ2; ARRB1; POU3F1; ZFPM1; MLXIPL; NFATC2; STAT4; BACH2; EOMES; OTX1; HABP4; CALCOCO1; HOXA1; TCF24; SIRT7; CITED1; TFAP2E; ZNF23; ZNF217; JUP; ASCL2; YBX2; CREG1; TOX3; SUB1; SOX11; ARNTL; PML; RNF141; DTX1; TOX4; KLF2; CAMTA1; MXI1; CARHSP1; TCFL5; TRIM32; NFIL3; CRK; PRDM8; MAK; KLF5; RFXAP; EBF4; SALL4; KLF11; JARID2; PBXIP1; CBX7; ANKRD1; CITED4; KDM1B; DMRTA1; MEIS1; LIN28A; ZBTB8B; WWC1; HDAC11; ZNF654; ID4; TBX1; FOXA1; TCF7; AHR; ATF6; ESX1; ADRB2; MED31; LHX2; TOX2; BTAF1; BAZ2A; E2F2; BPTF; CRYM; ATF3; LZTS1; PROX1; PRDM2; CCNH; NR3C2; HOXA4; HTATIP2; ALX1; SMAD6; RBL2; FOXO1; ZBTB42; RFX3; SUPT5H; MSX2; RORA; ID2; ID1; LEF1; SSBP3; ZIC1; PAWR; NR4A3; TULP2; FOXD4; KLF10; HOXD1; TSC22D2; MDM2; BRD4; ID3; NLK; NR2E1; FOSB; PIAS1; KMT2C; RORB; IRF7; CUX2; ZNF394; HMG20B; RB1; MGA; FHL1; NRBF2; RIPK3; FOXC1; LCOR; PIAS4; IRF8; CDIP1; GZF1; SOX13; HELZ2; POLR3C; NR2F1; GRIP1; PRDM6; LHX9; GRHL1; NR4A1; PYGO2; BASP1; ZNF7; ASCL3; MYRF; BCL10; DLX2; ENY2; IRF5; MED30; SIRT2; LIN28B; CCNT1; MAFK; RORC; MLXIP; PPARGC1A; CEBPB; APBB1; CSDC2; HIVEP1; PSIP1; TAF10; ZNF516; PRKDC; KAT6B; RCOR1; TEAD1; MED4; NHLH2; RARB; UBE2I; PPARD; NFE2L2; ZBTB18; HEY1; ERCC3; LHX1; RHOA; USP16; PPARA
Down-regulation 133 CCNA2; TGFB1I1; CEBPA; PMF1; E2F8; ATF5; SRSF8; TOX; FOXM1; ZNF521; ZNF260; NFIX; XBP1; USF2; CHD3; CBX5; NFKB1; BLM; TP53; TBX18; MBD3; ZNF25; ZNF467; NAB2; TONSL; ZNF354C; PIAS3; TRIP6; PPRC1; ATF4; BRIP1; SUV39H1; IFI16; CBFB; ZNF32; ZNF653; STAT6; TFDP1; HMGB3; RBM14; ZNF362; HOXC8; BNC2; HMGB2; MYBL2; TFAP4; SP7; CTBP1; ERG; TAF1D; FOXC2; MXD4; CARM1; CEBPG; MYOG; SETD7; RARG; ZNF827; SIAH2; SREBF2; BBX; SMARCAD1; COMMD3-BMI1; CNOT6; ZNF112; KCNIP3; CERS2; SOX9; BRCA1; KLF14; ZBTB1; SMARCD1; ING5; ZNF236; TBX4; E2F7; FLI1; RUVBL1; NFYC; SRF; CDK7; ZNF532; HIPK3; STAT5A; TRPS1; GLI2; EMX1; TADA2B; ERBB2; STAT5B; WDHD1; ZNF182; REXO4; FLNA; CLOCK; ZKSCAN8; PQBP1; DNMT1; HOXA11; ZEB1; MAGED1; ZNF160; ZBTB12; PITX1; SUZ12; ZNF195; ZNF746; RSF1; MSL3; NR3C1; ACTL6A; TAF5L; HDAC7; CTBP2; NFYA; ZNF274; FOXA3; MSGN1; TRIB3; KAT5; YAP1; ZNF423; TEAD2; ZBTB41; ZNF639; ZNF324B; ZNF449; HES2; ARL2BP; HIC1; PRDM16; NONO; ZNF845