Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID03318	Tnf	GSE14071	MEFs	Mouse	2h	10ng/ml	EID3821

Response Information :

Types	Number	Response transcription factors
Up-regulation	175	AFF4; ALX1; ALX4; ARID3B; ARID4A; ARNT2; ATF7; BCL3; BHLHA15; BIRC2; C1D; CAMTA1; CBFA2T3; CBX8; CCNC; CHD6; CREB1; CREB3; CREB3L3; CRX; CRYM; CSDC2; CUX2; DBX2; DDX54; DEK; DLX4; DLX6; DMRT1; E2F1; ELK1; ELK3; EMX2; ERBB4; ERCC2; ETV2; EVX2; FOSB; FOXI1; FOXN1; FOXP2; FOXS1; GBX1; GLIS1; GSC; GSX1; GSX2; HBP1; HDAC2; HES3; HES7; HESX1; HIVEP1; HIVEP2; HLTF; HMG20A; HNF1A; HNF1B; HNF4G; HOXA3; HOXB2; HOXC4; HOXC5; HOXC6; HOXC9; IKZF1; IKZF3; IKZF4; IRF1; IRF3; IRF4; ISL1; JARID2; KAT6B; KAT7; KDM4A; KDM5B; KLF9; LBX1; LEF1; LHX4; MAF; MAK; MDFI; MED13; MEF2B; MEIS3; MEOX1; MTDH; MYB; MYOG; MYRFL; NANOGP8; NCOR1; NEUROD6; NEUROG3; NFATC1; NFE2; NFE2L3; NFIX; NFKB2; NFKBIB; NFKBIZ; NR0B1; NR1I3; NR2C1; NR2C2; NR2F2; NR3C1; NR5A1; NRIP1; NSD1; OLIG2; OTX2; PBX4; PCGF3; PFDN5; PHF12; PHF8; PLAGL2; POU3F3; POU4F3; POU6F1; PPARGC1A; PPP1R13L; PRDM10; PRDM16; PRPF6; PSMD9; RARA; RB1; RCOR2; RELB; RNF20; RREB1; SAFB; SCAI; SCRT2; SMAD3; SMARCD1; SMYD1; SOX10; SOX14; SOX17; SOX30; SOX5; SOX8; SP140; SPIB; SPIC; ST18; STAT1; SUFU; SUPT7L; TADA1; TAF7; TAF7L; TBR1; TBX22; TCF15; TCF7; TERF2; TFDP2; TFEC; TOX2; TRAF6; TUB; VAX1; ZBTB34; ZBTB38; ZBTB49; ZGLP1; ZIC3; ZMIZ1; ZSCAN12
Down-regulation	250	ABL1; ACTL6B; AFF2; AIRE; AR; ARID2; ARID4B; ATF4; ATOH7; ATOH8; BACH2; BARHL1; BAZ1B; BCL11A; BCL11B; BHLHA9; BHLHE23; BRD8; CBX2; CBX4; CBX7; CDIP1; CDK7; CDX2; CDX4; CDYL; CENPB; CENPF; CHD7; CHD8; CITED1; CITED4; CUX1; DMRTA2; DMRTB1; DNAJC1; E2F2; EBF2; EBF4; EGR1; EGR2; EGR3; EGR4; EHF; ELF2; EMX1; EN1; ERF; ESR2; ESRRA; ESRRG; ETS2; ETV4; EYA1; EYA2; EZH1; FEV; FEZF2; FLI1; FOXB2; FOXJ2; FOXK1; FOXM1; FOXN2; FOXN4; FOXO4; GATA4; GATA5; GBX2; GFI1B; GMEB1; GRHL1; GRHL2; GRIP1; GTF2A1; GTF2IRD1; HDAC10; HDAC4; HES1; HES2; HES5; HEYL; HIC2; HIPK1; HIPK2; HIRA; HMBOX1; HMX3; HNF4A; HOXA10; HOXA2; HOXA7; HOXB3; HOXB4; HOXB6; HOXB7; HOXB9; HOXC10; HSF2; ID2; ID4; IKZF2; IL16; IL31RA; ING3; IRF6; IRF8; ISX; ITGB3BP; KAT6A; KDM5A; KDM5D; KLF15; KLF17; KLF2; KLF4; LHX1; LHX6; LHX9; LMCD1; MAFB; MAPK8IP1; MDM2; MDM4; MED15; MED17; MED26; MEF2C; MEN1; MEOX2; MGA; MITF; MNX1; MSC; MTA3; MTF2; MXD1; MYF6; MYNN; MYRF; NCOA1; NEUROD1; NEUROD4; NEUROG2; NFAT5; NFATC4; NHLH2; NPAS2; NR0B2; NR1H3; NR1H4; NR4A1; NR6A1; NRL; OLIG3; ONECUT2; OSR2; PATZ1; PAWR; PAX3; PAX4; PAX9; PDX1; PEG3; PHF2; PHOX2A; PHOX2B; POLR2A; POU2F1; POU2F2; POU3F2; POU3F4; POU5F1; PPARA; PRDM14; PROX1; PROX2; PTTG2; RBBP8; RBL1; RBPMS; RFC1; RNF10; RORC; RUNX3; RXRA; RXRG; SALL1; SALL3; SALL4; SATB1; SATB2; SETDB1; SFMBT1; SHOX2; SIX3; SIX6; SMARCE1; SNAPC4; SOX18; SOX9; SP8; SPDEF; SRY; SSBP2; SUV39H2; TADA3; TAL1; TBX19; TBX2; TBX20; TBX3; TBX4; TBX6; TCF20; TCF21; TCF23; TCF3; TCF7L2; TEF; TFAP2C; TFAP2D; TFCP2L1; TGS1; THRB; TLE4; TLX3; TRAK1; TRIM27; TRIM6; TRIP11; TULP1; WNT3A; WWC1; ZBTB1; ZBTB16; ZBTB17; ZBTB25; ZBTB26; ZBTB37; ZBTB48; ZEB1; ZEB2; ZFAT; ZFP57; ZFP14; ZFP92; ZIC1; ZIC2; ZIC4