Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID03317 Tnf GSE14071 MEFs Mouse 0.5h 10ng/ml EID3820
Types Number Response transcription factors
Up-regulation 200 AEBP2; AFF4; ALX1; ALX3; ALX4; AR; ARID4A; ARNT2; ARX; ASCL2; ASCL3; BATF; BAZ2B; BRDT; BRWD1; C1D; CAMTA1; CBFA2T3; CBX8; CCNC; CDK2; CECR2; CHD6; CIITA; CREB3L3; CREBBP; CRX; CSDC2; CUX2; DCC; DDX54; DMBX1; DMRTA2; DTX1; E2F1; EGR2; ELF5; EN2; ERBB4; ESR1; ETV2; EWSR1; FEZF1; FIGLA; FOS; FOSB; FOXA2; FOXD3; FOXJ3; FOXL2; FOXP2; GBX1; GCM2; GFI1; GSC; HAND1; HBP1; HDAC10; HDAC2; HES3; HIC2; HMG20A; HNF4G; HOPX; HOXA10; HOXA3; HOXB1; HOXB5; HOXC4; HOXC6; HOXD1; HR; HSF2; HSF4; IKZF1; INSM1; IRF1; IRF3; IRX4; JARID2; JDP2; JMY; JUNB; KAT7; KDM2A; KDM5D; KLF10; KLF12; KLF13; KLF14; KLF9; LBX1; MAF; MDFI; MED13; MEF2C; MEIS2; MIXL1; MTDH; MTF1; MYB; MYBL1; MYF5; MYRFL; MYT1L; MZF1; NCOR1; NEUROD6; NEUROG1; NEUROG3; NFATC1; NFE2L3; NFIA; NFKBIA; NFKBIZ; NR1I3; NR2E1; NR2E3; NR2F2; NR3C1; NR5A1; NR5A2; NRIP1; NRL; NSD1; OLIG2; OSR2; PAX5; PCBD1; PCGF3; PDLIM1; PFDN5; PHF19; PHF8; PLAG1; PNRC2; POLR2A; POU2AF1; POU3F1; POU3F3; POU4F3; PPARD; PPP1R13L; PRDM10; PRDM16; PRDM8; RCOR2; RELB; REPIN1; RFX4; RLF; RNF2; RNF20; SAFB; SCAI; SCRT2; SFMBT1; SIN3B; SIX4; SKOR1; SMAD3; SMARCD1; SOX17; SOX30; SOX6; SOX7; SP6; SP8; SPI1; SPIB; ST18; SUFU; SUPT7L; TADA1; TAF7; TAL2; TBX22; TBX3; TBX6; TCF7L2; TFDP2; TFEC; TOX2; TOX3; TRIM33; TSHZ2; TUB; UBE2I; WWC1; ZBTB26; ZBTB34; ZBTB38; ZBTB8B; ZFP2; ZFP3; ZFP69; ZFP91; ZGLP1; ZKSCAN5; ZSCAN2
Down-regulation 203 ABRA; AFF2; AHR; AIRE; ARID2; ARID4B; ASCL1; ATF2; ATF7IP; ATOH7; BARHL1; BARX1; BAZ1B; BCL11B; BHLHA15; BHLHE23; BRD4; BTG1; CBX7; CDX2; CDYL; CEBPA; CENPB; CHD9; CREB5; CUX1; DLX3; DMRT3; DMRTB1; DNAJC2; E2F2; EBF2; ELF2; ENY2; EP400; EPC1; ERF; ESR2; ESRRB; ESRRG; ETV5; EYA2; FOXA3; FOXB1; FOXF1; FOXH1; FOXJ2; FOXK1; FOXN4; GATA4; GATA5; GRHL1; GRHL3; GRIP1; GSX2; HAND2; HES5; HEYL; HIC1; HIPK2; HIVEP3; HMGB4; HMX3; HNF1A; HNF4A; HOXB2; HOXB4; HOXB9; HOXC10; HOXC5; IFNB1; IKZF2; IL16; INSR; IRF6; ISL1; ISX; KCNIP3; KDM5A; KDM5C; KLF1; KLF17; KLF5; KMT2C; KMT2E; LEF1; LHX1; LHX3; LHX5; LHX6; LIN28A; LPIN2; MAFB; MDM2; MED15; MEIS1; MEOX2; MLXIPL; MNT; MSC; MSGN1; MTF2; MYF6; MYOCD; MYOD1; MYT1; NCOA7; NEUROD2; NEUROD4; NEUROG2; NFATC2; NFE2L2; NR1I2; NR2F1; NR4A2; NR4A3; NR6A1; NUP62; OLIG1; OTX1; PAX1; PAX4; PAX8; PAX9; PDX1; PEG3; PGR; PHIP; PKNOX2; PML; PNRC1; POU2F1; POU3F2; POU3F4; POU4F1; POU4F2; PRDM14; PROX2; PRRX1; RBL1; RBPJL; RBPMS; RFX2; RFX8; RORB; RORC; RUNX3; SALL1; SALL3; SALL4; SATB2; SCRT1; SETDB1; SIX6; SMARCA5; SMARCE1; SMYD1; SNAPC4; SOX2; SOX21; SOX5; SP5; SPDEF; SPIC; SSBP2; TADA3; TAL1; TBL1XR1; TBX1; TBX20; TBX21; TCF12; TCF23; TCF3; TEF; TFAP2C; TFAP2D; THRB; TLE4; TOB1; TRAK1; TULP1; VDR; VGLL1; VPS25; WIZ; WNT3A; WNT4; WT1; ZBTB16; ZBTB43; ZBTB44; ZBTB7A; ZEB1; ZEB2; ZFAT; ZFHX2; ZFP30; ZFP57; ZFP92; ZHX3; ZIC2; ZMIZ1