Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID00522 Doxycycline GSE130381 ESCs Human 48h 1ug/ml EID1017
Types Number Response transcription factors
Up-regulation 260 HOXB4; HOXA1; TFAP2A; CDX2; HOXB2; HOXB3; EBF1; HOXA2; SALL3; PROX1; RXRG; SRSF2; EVX1; HOXB7; ID3; NEUROG2; HOXD1; CTNNB1; NR6A1; ZIC4; IKZF1; ZNF641; ESX1; HOXB5; SP8; MSGN1; E2F2; ZIC1; FOXD2; SOX11; E2F7; DMRT3; ZNF521; HOXA7; ZFP36L2; PPARG; FOXA2; DMRT1; HOXA3; SOX14; SKOR1; PURA; ZNF441; MYCL; VGLL4; GATA6; ID2; CDX1; ASXL1; HOXB9; PRDM6; SP9; ZEB2; POU3F2; SMAD3; HIVEP3; TBX6; NRIP1; ZNF831; SP6; FOXB1; DDX17; ZFP3; JDP2; HIPK2; TEAD1; TSHZ1; ATOH8; PAX2; EOMES; MLLT6; E2F1; ZNF367; SOX8; PGR; HMGA2; GBX2; PAX3; EZH2; HOXB8; MYOCD; ZFPM2; MYCN; NFE2; MNX1; ZNF436; CITED2; TLX2; RFX4; TCF7; ZNF214; ZFP36L1; MEIS1; ZNF70; MESP1; WTIP; DACH1; ZNF584; ZFHX3; IRX1; ZNF423; EBF3; PRRX1; SP5; WNT3A; KLF11; MSX1; PKNOX2; ZNF76; ZNF664; ZBTB7C; IRF8; CHD1; ZNF853; HOXC4; THAP10; MEIS2; ZNF540; BMI1; ZNF443; ZNF837; ATF3; HES7; ZNF497; TBX5; MYRFL; ALX4; FOXB2; MIXL1; HOXB1; ZNF618; PLAGL1; PITX2; LEF1; ARID5A; PAX7; CENPB; BCLAF1; RFX6; ZNF610; ARL2BP; IRX3; ZNF117; ZNF763; GATA4; SETD7; NCOA6; CEBPE; FOXC2; MYF5; ZIM3; KLF17; CASZ1; MXD4; DRGX; SMARCD3; MAML3; FOXC1; FOXF1; NFIC; SRCAP; CAMTA2; KMT5A; TBX10; GCM1; TBX3; GCFC2; MAEL; ZNF740; LHX2; ZNF568; ZNF600; TBX15; CCNE1; DLX5; IFI16; GATA5; HR; ZNF781; MSX2; GSC; KLF5; LBX2; ABRA; YAF2; ZNF234; SOX1; CBFB; CBFA2T3; HOXA5; LHX4; ZNF358; FOXD1; ZNF491; ZNF583; SNAPC4; IRX5; ZNF180; RARB; ZNF565; SOX7; ZSCAN16; MECOM; BACH2; ARID4A; POU2AF1; FOXL1; ZGLP1; TFAP2E; SCRT1; ZNF284; ZFP2; ZNF709; TCF23; HSFX1; ZNF467; NR4A2; PRDM1; KLF4; SOX6; ZBED6; HNF4A; HNF4G; PAX5; HOXB6; ANKRD1; HSFX2; RHOXF2; HOXA13; SOX30; HNF1A; CREB3L3; TP63; ARID3C; ZBTB16; ZNF728; HOXA4; HOXB13; HMX1; HOXA10; ZNF676; ASCL1; DBX1; FOXQ1; HOXD13; POU4F1; ZNF716; NR0B1; ZNF628; ZBED1; EGR3; SP140; NPAS2; HLX; TERB1; L3MBTL4; AR; PAX9; STAT4; ESR2
Down-regulation 183 TERF1; TCF7L2; UTF1; KDM4A; SOX21; SIX2; OTX2; DNMT3B; NR3C1; POU3F4; SAP18; MYC; TFAP2C; SALL2; TFEB; TXNIP; FOXO1; ZBED3; TFE3; NR3C2; PRDM14; TOX; OVOL2; ZNF770; ZNF488; TP73; HESX1; TOB1; LMCD1; MYB; TCF24; TCF12; POU2F3; ZNF217; HDAC9; HEY2; SOX4; FOXD3; IRF6; SP140L; FEZF1; ETS1; ZNF160; DLX4; MAFB; ELF3; PIR; ASCL2; POU5F1; PDLIM1; BCL6; ETS2; ZNF398; IRF4; OTX1; NPAS1; IRF9; FOXJ1; ZNF425; TRERF1; HES2; CEBPZ; BNC2; GRHL2; HHEX; AES; RORB; JUN; SOX10; PAWR; KLF9; SKIL; MXD1; KDM4C; MED17; OLIG2; NANOG; SNAI3; ZNF75D; HSF4; ONECUT1; TRIM22; CREB3L1; GRHL3; TLE2; DCC; OVOL1; VENTX; ZNF165; CHD2; POU3F1; ISL2; TFCP2L1; ZNF721; HNF1B; ZNF157; ERG; RIPK3; JUND; WNT4; BARHL2; ETV3L; VSX2; ELF4; ZNF341; SIX1; TCF7L1; EGR1; NHLH2; CRYM; OLIG1; ZNF296; CRX; KLF7; THRB; FOSL1; GLI1; FOXN2; ACTL6B; NEUROD2; ZNF276; AHR; BCL3; ARX; ZNF630; ATF5; NFKBIZ; ZFP57; CEBPD; SP110; MYT1L; ZNF860; FOXP3; LHX1; NOTO; STAT5A; BHLHE41; ZFHX2; VDR; TGFB1; EMX1; LHX6; PPARGC1A; MSC; BATF3; FOXI2; LMX1B; ZNF835; EGR2; PRDM7; ZNF213; FLI1; CITED1; HEY1; FOSB; ZNF556; NPM2; HMX2; ZNF575; ALX3; MEOX2; BHLHE23; BHMG1; GCM2; MYOG; RHOXF1; NR4A3; IRX6; HES5; LHX8; FOXE1; SSX1; LHX5; SMYD1; ADRB2; RUNX1; ZNF208; GFI1; BNC1; TPRX1; FOXO6; TAF7L; MEF2C