Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID00521 Doxycycline GSE130381 ESCs Human 24h 1ug/ml EID1016
Types Number Response transcription factors
Up-regulation 240 TWIST1; HOXB13; NEUROG1; DLX2; FOXA2; ZNF283; PROX1; ZIC4; CDX2; HOXA2; SOX14; DMRT1; CTNNB1; ANKRD1; POU4F1; ZNF521; HOXA1; SP9; ID3; DLX6; PPARG; SOX30; EVX1; ABRA; ARID3C; FOXD2; ZIM3; IKZF1; NR2F2; ID2; HOXB3; MYF5; GCM1; SALL3; ZBTB32; SKOR1; E2F7; ZFP3; RXRG; PURA; SOX11; ZIC3; NFE2; HELT; ZFPM2; ZIC1; JDP2; SP8; TBX1; FOXB1; MYCL; SMARCA2; CBFA2T3; ZEB2; NEUROG2; ZNF441; EBF3; ZFP64; EOMES; TEAD1; DBX1; MNX1; GBX2; LHX4; FOXG1; DLX5; CHD1; NRIP1; ZNF540; ZNF214; ZNF70; TBX21; ZNF763; HES3; HIPK2; TLX2; HOXA10; ERBB4; KLF5; PRDM12; PRDM13; HOXB2; ZNF853; HOXA11; MYF6; HOXA13; ZNF547; FERD3L; CTCFL; SMAD7; SP5; MEIS1; ATOH8; HOXD1; CDX1; CITED2; KLF11; SOHLH2; ZNF367; IL16; RAX2; PAX3; BMI1; TBX22; MYOCD; TFAP2B; TSHZ1; MESP1; ATOH1; DACH1; TCF7; HOXA3; LEF1; TBX3; ZBTB42; BRDT; MXD4; ZNF716; ZNF728; ZNF837; PRDM6; NEUROG3; GATA5; WT1; ESX1; ZFP36L2; CREB3L3; PRRX1; MSX1; SOX3; INSM1; HOXA7; MAEL; FOXP2; TCF23; IRF8; HOXD13; ARID5A; ZFP69; ZNF831; TBX20; MIXL1; ZNF257; MEIS2; FOXL2; HOXC4; TBX10; EBF1; ZFHX4; ZNF780B; ZFHX3; SNAPC4; POU2AF1; PLAGL1; CALCOCO1; ZNF234; RUNX3; GLIS3; ZNF568; EGR1; HNF1A; LBX2; RFX4; RFX6; ZBTB16; HOXB1; ZNF565; ZNF583; FOXA1; GATA4; ALX4; HAND1; TBX15; VGLL2; CCNE1; FOXL1; FOXD1; ZSCAN16; SOX7; PITX2; RUNX2; MSX2; SOX6; ZNF774; NFIC; EGR3; ZNF284; EMX2; MECOM; DMBX1; PAX7; TFAP2D; GSC; HOXA9; SPDEF; BACH2; HIVEP3; TFAP2E; IRX5; NFIX; KLF4; CD3D; LHX2; GRHL1; PAX5; ZNF709; FOS; ZNF781; EPAS1; YAF2; NPAS2; ZNF469; KLF2; NFATC2; ZGLP1; ZBED6; TRIM29; HSFX1; ZNF471; TBX2; PGR; HMGB4; ZNF705D; OSR1; FOXC1; BHLHA15; ZBED1; ZNF812P; HNF4G; ZNF628; STAT4; NR4A3; AR; PROX2; RFX8; HIVEP2; PRDM1; ZNF729; PAX9; ESR2
Down-regulation 115 SKIL; ETV5; TERF1; FOXO1; TXNIP; TP73; POU3F4; SOX4; UTF1; FOXD3; TSHZ3; ETS1; ONECUT1; TFEB; ENO1; LMCD1; PRDM14; MYB; SALL2; HDAC9; TFAP2C; ARRB1; POU3F1; SOX21; MDFI; TGFB1; HHEX; TRERF1; TFE3; BCL6; TRIM22; CRYM; CEBPZ; NOTO; EGR2; ETS2; ZNF143; ZNF160; PIR; MED17; ZNF341; AFF3; MYC; BNC2; MAFB; TCF24; IRF9; TLE2; FOXJ1; FOXN2; FOSL1; GRHL3; JUN; LMO1; SIX2; KLF9; HES4; LZTS1; JUND; IRF4; HES1; OLIG2; HSF4; ASCL2; WNT4; HEY2; VSX2; ELF3; SIX1; NR3C1; CITED1; ACTL6B; CDX4; GLI1; RAX; MYT1L; HES7; OLIG1; ZNF775; SOX10; BARX1; BHLHE40; ZBED3; DLX4; ZNF536; SPIB; MSC; FLI1; ETV3L; ISL2; CRX; SHOX; CEBPD; ESRRB; MEF2B; VDR; ETV2; SHOX2; ONECUT3; FOXI2; BATF3; ARX; BARHL2; CREB5; FOXO6; BHLHE23; BHMG1; SOX17; SSX1; HLF; ZNF575; PPARGC1A; RUNX1; IRX6; TPRX1